Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq70036 91.5 2e-13 seq72101 86.0 7e-12 >seq70036 Length=130556 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 || ||||| |||||||| || || | | |||||||| || |||| || |||||| Sbjct 52286 GAGTCTCGGATGTATGTGTCAATCAGTAAGCTGTACATTTCTGAGTGGATGTTTTCCATT 52227 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||| |||||||| ||||| || || ||||| ||| ||||||| ||||| |||||| Sbjct 52226 GCAATCTGGAATCCATAGAAGCACCTTGCTTCTGTGCTCTGCACCTCTTGGCTAAATCTT 52167 Query 93473 TCTAC 93477 || || Sbjct 52166 TCAAC 52162 >seq72101 Length=85746 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 ||||||| |||||||| || || | | |||||||| || |||| || ||||| Sbjct 43105 GAATCTCTGATGTATGTGTCAATGAGTAAGCTGTACATTTCTGAGTGGATGTTTTCCATG 43164 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||| ||||| || ||||| || || ||||| ||| ||||||||||||| |||||| Sbjct 43165 GCAATCTGGAACCCATAGAAGCACCTTGCTTCTGTGCTCTGCACTTCTTGGCTAAATCTT 43224 Query 93473 TCTAC 93477 || || Sbjct 43225 TCAAC 43229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556333898311040