Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1757 132 4e-26 seq1554 132 4e-26 seq8201 93.3 4e-14 seq39745 89.7 4e-13 >seq1757 Length=74305 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| ||||| |||| || ||||| |||| ||||| |||||| | Sbjct 33227 AAAATGCAGATCTTTGTCAAAACACTAACTGGCAAAACTATCACCCTTGAGGTGGAACCA 33168 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | ||| || || |||||||||||||| ||||| || ||| Sbjct 33167 AGTGACACAATCGAGAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGAT 33108 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||||||||| ||||| || || || | || ||| |||||| | || || ||| Sbjct 33107 CAGCAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTAC 33048 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||||||| | ||| | || |||| | || || ||| Sbjct 33047 AACATCCAGAAGGAATCCACACTCCATCTCGTCCTGCGTCTCCGTGGTGGT 32997 Score = 118 bits (130), Expect = 9e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| | || ||||| |||||| | | || ||| | || || | ||| || Sbjct 26645 GGTAAAACCATTACCCTTGAGGTGGAACCAAGTGACACCATTGAGAATGTGAAAGCCAAG 26586 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || |||||||||||||| ||||| || ||||| ||||||||||| ||||| || || || Sbjct 26585 ATCCAAGACAAGGAGGGCATTCCCCCAGATCAGCAACGTCTTATCTTTGCTGGAAAGCAA 26526 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| ||| || | ||||| |||||||| || || |||||||| | ||| | Sbjct 26525 CTTGAAGATGGCCGTACATTGTCCGACTACAACATCCAGAAGGAATCCACACTTCATCTT 26466 Query 22426 GTTTTGCG 22433 || ||||| Sbjct 26465 GTGTTGCG 26458 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| |||| ||||| || ||| | | |||||| | || || | || ||| Sbjct 25377 GGTAAAACTATCACCCTTGAGGTAGAACCAAGCGATACAATTGAGAATGTAAAGACCAAA 25318 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||| || ||||| || ||||| |||||| | || || || || ||||| Sbjct 25317 ATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTTTGATCTTCGCTGGAAAACAA 25258 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| ||| || | ||||| |||||||||||||| || || || | ||| | Sbjct 25257 CTTGAAGATGGCCGTACATTGTCCGACTACAACATTCAAAAGGAGTCTACTCTCCATCTT 25198 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||| || ||| Sbjct 25197 GTCTTGCGTCTGCGTGGTGGT 25177 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || ||||| || ||| | | || || | || || | ||| ||| || ||||||||| Sbjct 23337 ACCCTTGAGGTTGAACCAAGTGACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAG 23278 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 || || ||||| || ||||| ||||||||||| || || || || || | || ||| Sbjct 23277 GAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAACTTGAAGATGGT 23218 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTG 22437 |||||| | || ||||||||||| ||||| ||||| || | ||| | || ||||| || Sbjct 23217 CGCACCCTTTCAGATTACAACATCCAAAAGGAATCAACTCTCCATCTTGTCTTGCGTTTA 23158 Query 22438 CGCGGAGGT 22446 || || ||| Sbjct 23157 CGTGGTGGT 23149 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || ||||| |||| ||||| || ||| | | || ||| | || || |||| || Sbjct 29746 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTAAG 29687 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || |||||||| || ||||| || || ||||| ||||||||||| || || || || ||| Sbjct 29686 ATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAG 29627 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| |||||| | || || |||||||| || ||||| ||||| | ||| | Sbjct 29626 CTTGAAGATGGCCGCACATTGTCAGACTACAACATCCAGAAAGAGTCCACTCTCCATCTC 29567 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || ||||| | || || ||| Sbjct 29566 GTCTTGCGTCTCCGTGGTGGT 29546 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || ||||| |||| ||||| || ||| | | || ||| | || || |||| || Sbjct 31058 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTAAG 30999 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||| || || || || ||||| ||||||||||| || || || || || Sbjct 30998 ATCCAAGACAAGGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAA 30939 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| |||||| | || || |||||||| || || |||||||| | ||| | Sbjct 30938 CTTGAAGATGGCCGCACATTGTCAGACTACAACATCCAGAAGGAATCCACACTCCATCTC 30879 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 ||| |||| | || || ||| Sbjct 30878 GTTCTGCGTCTCCGTGGTGGT 30858 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || ||||| || ||| | | Sbjct 30432 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 30373 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||| || |||||||| || || || || || ||||| Sbjct 30372 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 30313 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | || ||| |||||| | || || |||||| Sbjct 30312 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAAC 30253 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| || || | ||| | || ||||| | || || ||| Sbjct 30252 ATCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCGTCTCCGTGGTGGT 30205 >seq1554 Length=107351 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| ||||| |||| || ||||| |||| ||||| |||||| | Sbjct 8015 AAAATGCAGATCTTTGTCAAAACACTAACTGGCAAAACTATCACCCTTGAGGTGGAACCA 8074 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | ||| || || |||||||||||||| ||||| || ||| Sbjct 8075 AGTGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGAT 8134 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||||||||| ||||| || || || | || ||| |||||| | || || ||| Sbjct 8135 CAGCAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCGGACTAC 8194 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||||||| | ||| | || |||| | || || ||| Sbjct 8195 AACATCCAGAAGGAATCCACACTCCATCTCGTCCTGCGTCTCCGTGGTGGT 8245 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| | || ||||| || ||| | | ||| || | || || | || ||| Sbjct 17851 GGTAAAACCATAACCCTTGAGGTAGAACCAAGCGACACAATTGAGAATGTAAAGACCAAA 17910 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||| || ||||| || ||||| ||||||||||| || || || ||||| Sbjct 17911 ATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAACAA 17970 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| |||||| | ||||| |||||||||||||| ||||| ||| | ||| | Sbjct 17971 CTTGAAGATGGCCGCACATTGTCCGACTACAACATTCAAAAGGAATCAACCCTCCATCTT 18030 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || ||||| | || || ||| Sbjct 18031 GTCTTGCGTCTCCGTGGTGGT 18051 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || ||||| || ||| | | Sbjct 10073 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 10132 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||| || |||||||| || || || || || ||||| Sbjct 10133 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 10192 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | || ||| |||||| | || || |||||| Sbjct 10193 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAAC 10252 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| || || | ||| | || ||||| | || || ||| Sbjct 10253 ATCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCGTCTCCGTGGTGGT 10300 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 22215 AAAG-ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||||| |||||||| ||| | || ||||| |||| ||||| || ||| Sbjct 10721 AAAGTATGCATGTTTTTGTTT----TTTTTCAGGCAAAACTATCACCCTTGAGGTAGAAC 10776 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | |||||| | || || |||| || || |||||||| || || || || || | Sbjct 10777 CAAGTGATACCATTGAGAATGTCAAGGCTAAGATCCAAGACAAAGAAGGCATCCCCCCAG 10836 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 |||| ||||||||||| || || || || || | || ||| ||| || | || || | Sbjct 10837 ATCAGCAACGTCTTATCTTCGCTGGAAAGCAACTTGAAGATGGCCGTACATTGTCAGACT 10896 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||| || ||||| ||||| | ||| | || ||||| | || || ||| Sbjct 10897 ACAACATCCAGAAAGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGTGGTGGT 10949 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || ||||| |||| ||||| || ||| | | || ||| | || || |||| || Sbjct 9872 GGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTAAG 9931 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || |||||||| || || || || || ||||| |||||||| || || || || || || Sbjct 9932 ATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTCATCTTCGCTGGAAAGCAA 9991 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| |||||| | || || ||||||||||| ||||| ||||| | ||| | Sbjct 9992 CTTGAAGATGGCCGCACATTGTCAGACTACAACATTCAGAAAGAGTCCACTCTCCATCTT 10051 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || ||||| | || || ||| Sbjct 10052 GTCTTGCGTCTCCGTGGTGGT 10072 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 |||||||| | || || || || ||| | | || ||| | || || | ||| || Sbjct 12996 GGTAAAACCATTACCCTGGAGGTTGAACCAAGTGACACCATTGAGAATGTGAAAGCCAAG 13055 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||| || || || || ||||| |||||| | || || || || || || Sbjct 13056 ATCCAAGACAAGGAAGGCATCCCCCCAGATCAGCAACGTTTGATCTTCGCTGGAAAGCAA 13115 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | || ||| |||||| | || || |||||||||||||| ||||| ||| | ||| | Sbjct 13116 CTTGAAGATGGCCGCACATTGTCAGACTACAACATTCAAAAGGAATCTACCCTCCATCTT 13175 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || || || | || || ||| Sbjct 13176 GTATTACGTCTTCGTGGTGGT 13196 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || | || ||||| || ||| | | Sbjct 13197 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 13256 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || ||||| || || || || || || ||||| Sbjct 13257 GACACTATTGAAAATGTAAAAGCTAAGATCCAAGATAAAGAAGGCATCCCCCCAGATCAG 13316 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || || || | || ||| |||||| | || ||||||||| Sbjct 13317 CAACGTTTGATCTTCGCTGGAAAGCAACTTGAAGATGGTCGCACCCTTTCAGATTACAAC 13376 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | ||| | || ||||| | || || ||| Sbjct 13377 ATCCAAAAGGAATCAACTCTCCATCTTGTCTTGCGTCTACGTGGTGGT 13424 >seq8201 Length=93372 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796 |||| || || ||||| | ||| | ||||||| ||| ||||| |||| | || ||||| Sbjct 62754 TGTATTCTACTATTTCAGTGCAAAGATTACTACATTTGATGGTTCCCAGGTTCTGTTGAT 62813 Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCG 129856 |||| ||| | |||||| ||||||||||| |||||| || | ||||| || ||||| | Sbjct 62814 TACTCTTCCTATTGCAATGATCTTTGTACAGCATGTAAGGGTTCCCCGTCTCTACTTGGG 62873 Query 129857 TTTC 129860 ||| Sbjct 62874 CTTC 62877 >seq39745 Length=16847 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796 |||| || || ||||| | ||| | ||||||| ||| ||||| |||| | || ||||| Sbjct 5998 TGTATTCTACTATTTCAGTGCAAAGATTACTACATTTGATGGTTCCCAGGTTCTGTTGAT 5939 Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCG 129856 |||| ||| | |||||| ||||||||||| |||||| || | || || || ||||| | Sbjct 5938 TACTCTTCCTATTGCAATGATCTTTGTACAGCATGTAAGGGTTCCCTGTCTCTACTTGGG 5879 Query 129857 TTTC 129860 ||| Sbjct 5878 CTTC 5875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419340782032240