Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_011085.3 Length=38457 Score E Sequences producing significant alignments: (Bits) Value seq71541 98.7 2e-16 >seq71541 Length=7229 Score = 98.7 bits (108), Expect = 2e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 14786 GAGTTGCGCTGTCTGGCTCACTTCATGGCTCGTTTTGATAATGGTGAGTACGCTCACGAG 14845 ||| || | || ||| |||||||||||| ||||||||| |||| | |||| ||| ||| Sbjct 670 GAGCTGAGATGCCTGTCTCACTTCATGGGCCGTTTTGATGATGGCGCATACGGTCAAGAG 729 Query 14846 ATTCTTAACGGGGACATCCACACCAAGAACCAGAATGCTGCGGAACTACCTACACGAGAC 14905 | || || || || ||||| ||| || || | || || | ||| ||||| || Sbjct 730 TTGCTCAAGGGCGATATCCATACCGTCAATCAACACGCAGCAGGACTTGAGACACGCAAC 789 Query 14906 AACGCCAAGACATTCATCTACGGGTTCCTTTATGGTGCTGGTGATGAGAAGATTGGACAG 14965 | ||||||| ||||||||||| ||||| || || ||||||| | ||||| || Sbjct 790 CAGTCCAAGACCTTCATCTACGGCTTCCTGTACGGAGCTGGTGCCGCAAAGATCGGTTCT 849 Query 14966 ATTGTTGGT 14974 ||||| ||| Sbjct 850 ATTGTCGGT 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122830289744288