Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1554 86.0 6e-12 seq1757 82.4 8e-11 >seq1554 Length=107351 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | ||| | | |||| ||||||||||||||||||||| | Sbjct 18050 CCACCACGGAGACGCAAGACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGAC 17991 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || |||||||| || | |||| ||||| || || || || || Sbjct 17990 AATGTGCGGCCATCTTCAAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGA 17931 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| |||||| |||| | || | |||||| | | || ||| Sbjct 17930 ATGCCTTCCTTGTCTTGGATTTTGGTCTTTACATTCTCAATTGTGTCGCTTGGTTCTACC 17871 Query 138568 TCGACCGTCAGCGTTTTACC 138587 || | || | |||||||| Sbjct 17870 TCAAGGGTTATGGTTTTACC 17851 >seq1757 Length=74305 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || | ||| | | |||||||||||||||||||||||| | Sbjct 25178 CCACCACGCAGACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAC 25237 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || |||||||| || | |||| | ||| || || || || || Sbjct 25238 AATGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGA 25297 Query 138508 ATACCTTCTTTGTCGGTGATTTT 138530 || ||||| ||||| |||||| Sbjct 25298 ATGCCTTCCTTGTCTTGGATTTT 25320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495792836517120