Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq72101 87.8 2e-12 seq70036 87.8 2e-12 seq39745 86.0 8e-12 seq8201 86.0 8e-12 >seq72101 Length=85746 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 127559 TCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAA 127618 ||||| ||||| | ||||||||||| ||||| ||||||||||||||| || ||| | Sbjct 42123 TCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTCAACCAGAAGATAGCAGCA 42182 Query 127619 AATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAA 127661 || || || ||||| ||||| ||||| ||| ||||| |||| Sbjct 42183 AAGGAACCTGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCAA 42225 >seq70036 Length=130556 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 127559 TCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAA 127618 ||||| ||||| | ||||||||||| ||||| ||||||||||||||| || ||| | Sbjct 53185 TCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTCAACCAGAAGATAGCAGCA 53126 Query 127619 AATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAA 127661 || || || ||||| ||||| ||||| ||| ||||| |||| Sbjct 53125 AAGGAACCCGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCAA 53083 >seq39745 Length=16847 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||||| |||| | ||||||||||||| ||||||||| || ||| Sbjct 13267 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 13208 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 || || ||||||||||| | || || ||||| || Sbjct 13207 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACG 13173 >seq8201 Length=93372 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||||| |||| | ||||||||||||| ||||||||| || ||| Sbjct 59181 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 59240 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 || || ||||||||||| | || || ||||| || Sbjct 59241 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACG 59275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612926699487360