Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_013651.1 Length=38497 Score E Sequences producing significant alignments: (Bits) Value seq54356 82.4 2e-11 >seq54356 Length=14911 Score = 82.4 bits (90), Expect = 2e-11 Identities = 119/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 36429 CACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGTGCAGAC 36488 ||||| || || || ||||| || || || ||||| ||| | || || |||||||| || Sbjct 2612 CACTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGAT 2553 Query 36489 ATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCGACACAG--GCTGCAAGAG 36546 | || || || |||||||||||||| | || ||| | || || ||| ||| | | Sbjct 2552 CTGCTGATCGCTGATGACGTTGAGGTCCTGAACAACGCCGCAACCCAGCAAATGC--GGG 2495 Query 36547 ACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCC 36592 || || || ||| | || ||||| |||||||| ||| | ||||| Sbjct 2494 ACAAGCTCGGCGAGGTGGTCAAGGAATTTGACGCCATCCTCAAGCC 2449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122958174686368