Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1554 93.3 5e-14 seq1757 84.2 2e-11 >seq1554 Length=107351 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || | || |||||| || ||||| | || ||||||||||| ||||| Sbjct 13430 TTATTGACCACCACGTAGACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTA 13371 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || || ||||| | || || || ||||| || ||||| ||||| || ||||| || Sbjct 13370 ATCTGAAAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATC 13311 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | || | || || || || |||||| || | | | | ||||| || | Sbjct 13310 TGGGGGGATGCCTTCTTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTGTCACTTGG 13251 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || | || ||||| ||||| || || || || || ||||||||||| Sbjct 13250 TTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 13197 >seq1757 Length=74305 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| || ||||| | ||| ||||||||| || ||||||||||| | || || | Sbjct 25189 ACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGACAATGTACGGCC 25248 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || || || || ||||| ||||| || ||||| || | || | || ||||| Sbjct 25249 ATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTT 25308 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||| || |||| | || | | || ||||| | ||| || || | ||||| Sbjct 25309 GTCTTGGATTTTGGTCTTTACATTCTCAATTGTATCGCTTGGTTCTACCTCAAGGGTGAT 25368 Query 46558 GGTTTTGCC 46566 ||||| || Sbjct 25369 AGTTTTACC 25377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564703571425920