Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq70036 131 2e-25 seq72101 118 1e-21 seq1757 93.3 4e-14 seq1554 93.3 4e-14 >seq70036 Length=130556 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 || ||||| |||||||||||||| || ||||| || || || |||| ||| ||| || Sbjct 51612 ACGAGATTCTCGTTGACGATGCCATCACTGGCAGCAAAGAACGCCAACACATGCGAAATA 51553 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || || ||||| | ||| | ||||| | | | ||||||||||||| |||||| Sbjct 51552 AAGTGCTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACC 51493 Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT 133458 |||||||| ||||| || |||||||| || || |||||||| ||| ||||| || Sbjct 51492 TCCTCGACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAAT 51433 Query 133459 TGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 || || || || || ||||| || ||||| || || Sbjct 51432 TGGATTGGGAAGATGACAAATCGACGGGGATTCTC 51398 >seq72101 Length=85746 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 || ||||| ||||| |||||||| || ||||| || || ||||||| ||| || || Sbjct 44433 ACGAGATTCTCGTTAACGATGCCATCACTGGCAGCAAAGAAGGCCAACACATGTGAAATA 44492 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || || ||||| | ||| | ||||| | | | ||||||||||||| ||||| Sbjct 44493 AAGTGCTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACT 44552 Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT 133458 |||||||| ||||| || |||||||| || || |||||||| ||| ||||| || Sbjct 44553 TCCTCGACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAAT 44612 Query 133459 TGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 || || || || || || || || ||||| || || Sbjct 44613 TGGATTGGGAAGATGACGAATCGACGGGGATTCTC 44647 >seq1757 Length=74305 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || ||||| || || |||||||| |||||| | || || || | Sbjct 33227 AAAATGCAGATCTTTGTCAAAACACTAACTGGCAAAACTATCACCCTTGAGGTGGAACCA 33168 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | |||| || |||| ||||| ||||| |||||| | || Sbjct 33167 AGTGACACAATCGAGAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGAT 33108 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || || || | || || || || || || || | ||||| | |||||| Sbjct 33107 CAGCAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTAC 33048 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| |||||| | || || ||| | || |||||| Sbjct 33047 AACATCCAGAAGGAATCCACACTCCATCTCGTCCTGCGT 33009 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||| ||| | || || || | | Sbjct 30432 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 30373 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| ||| |||| |||||||| || || ||| | || || Sbjct 30372 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 30313 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || || || || | ||||| | ||||||||| Sbjct 30312 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAAC 30253 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || ||| | || ||||| Sbjct 30252 ATCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCGT 30217 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| ||| |||| ||||| || || |||||| | || || || || || || | ||| Sbjct 23298 AAAGCAAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCT 23239 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 || || || || || || | |||||||| || |||||||||||||||||| | || Sbjct 23238 GGAAAGCAACTTGAAGATGGTCGCACCCTTTCAGATTACAACATCCAAAAGGAATCAACT 23179 Query 38442 CTGCATTTGGTGCTGCGTTT 38461 || ||| | || ||||||| Sbjct 23178 CTCCATCTTGTCTTGCGTTT 23159 >seq1554 Length=107351 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || ||||| || || |||||||| |||||| | || || || | Sbjct 8015 AAAATGCAGATCTTTGTCAAAACACTAACTGGCAAAACTATCACCCTTGAGGTGGAACCA 8074 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | |||| || |||| ||||| ||||| |||||| | || Sbjct 8075 AGTGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGAT 8134 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || || || | || || || || || || || | ||||| | |||||| Sbjct 8135 CAGCAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCGGACTAC 8194 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| |||||| | || || ||| | || |||||| Sbjct 8195 AACATCCAGAAGGAATCCACACTCCATCTCGTCCTGCGT 8233 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||| ||| | || || || | | Sbjct 13197 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 13256 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| || |||| || ||||| || || ||| | || || Sbjct 13257 GACACTATTGAAAATGTAAAAGCTAAGATCCAAGATAAAGAAGGCATCCCCCCAGATCAG 13316 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| || || || || || || | |||||||| || |||||| Sbjct 13317 CAACGTTTGATCTTCGCTGGAAAGCAACTTGAAGATGGTCGCACCCTTTCAGATTACAAC 13376 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || ||| | || ||||| Sbjct 13377 ATCCAAAAGGAATCAACTCTCCATCTTGTCTTGCGT 13412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||| ||| | || || || | | Sbjct 10073 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGT 10132 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| ||| |||| |||||||| || || ||| | || || Sbjct 10133 GACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAG 10192 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || || || || | ||||| | ||||||||| Sbjct 10193 CAACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAAC 10252 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || ||| | || ||||| Sbjct 10253 ATCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCGT 10288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499699536496640