Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq39745 91.5 2e-13 seq8201 89.7 6e-13 >seq39745 Length=16847 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| | ||||| | |||||| ||||||| |||||| ||||| ||| Sbjct 13267 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 13208 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | ||||||||||| | || | || |||||| || Sbjct 13207 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACGTACGCCATGTTTCTTGATCTCGGCC 13148 Query 106055 TTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTGA 106111 || || || |||||| | || | || | | || | || ||||||||||| |||| Sbjct 13147 TTAAGGGCAGCCCAGTCCCAAAGGTCAGTTGGAGTCTTAC---CCCACATATCATATTGC 13091 Query 106112 AG 106113 || Sbjct 13090 AG 13089 >seq8201 Length=93372 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| | ||||| | |||||| ||||||| |||||| ||||| ||| Sbjct 59181 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 59240 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | ||||||||||| | || | || |||||| || Sbjct 59241 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACGTACGCCATGTTTCTTGATCTCGGCC 59300 Query 106055 TTGAGAACATCCCAGTC 106071 || || || ||||||| Sbjct 59301 TTAAGGGCAGCCCAGTC 59317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589422560167040