Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_015208.1 Length=39562 Score E Sequences producing significant alignments: (Bits) Value seq54356 80.6 7e-11 >seq54356 Length=14911 Score = 80.6 bits (88), Expect = 7e-11 Identities = 119/169 (70%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 37361 CACTCTCCGTCCGTGAAGTCCGTGGGCGTGACTGGCGGTATGACCGGTAGCCGTGCTGAC 37420 ||||| || || || || || || ||| | || ||| ||||| || |||||||| Sbjct 2612 CACTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGAT 2553 Query 37421 ATACTGATCGCGGACGACGTTGAGGTCCCCGGTAACTCCGGCACTCAGTCGGCTCGTGAC 37480 | |||||||| || ||||||||||||| ||| ||| || ||| || ||| Sbjct 2552 CTGCTGATCGCTGATGACGTTGAGGTCCTGAACAACGCCGCAACCCAGCAAATGCGGGAC 2493 Query 37481 CATCTGGGCGAGCTGGTTAAGGAGTTCGATGCGATCCTGAAGCCGGGCG 37529 | || |||||| |||| ||||| || || || ||||| ||||||| || Sbjct 2492 AAGCTCGGCGAGGTGGTCAAGGAATTTGACGCCATCCTCAAGCCGGACG 2444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126363111269248