Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_015264.1 Length=40973 Score E Sequences producing significant alignments: (Bits) Value seq54356 80.6 7e-11 >seq54356 Length=14911 Score = 80.6 bits (88), Expect = 7e-11 Identities = 153/224 (68%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 36328 CACTCGCCCTCGGTGAAGTCTGTGGGTGTGACTGGTGGTATGACTGGTAGCCGTGCTGAC 36387 ||||||||||| || || ||||| || | || || ||||| || |||||||| Sbjct 2612 CACTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGAT 2553 Query 36388 ATCCTCATCGCGGACGACGTGGAAGTACCGGGCAACTCTGGGACGCA--ATCTGCACGGG 36445 | || ||||| || ||||| || || | | |||| | | || || | || |||| Sbjct 2552 CTGCTGATCGCTGATGACGTTGAGGTCCTGAACAACGCCGCAACCCAGCAAATG--CGGG 2495 Query 36446 ACCACCTCGGTGAACTCGTAAAGGAATTCGATGCGATCCTGAAGCCGGACG------GCA 36499 || | ||||| || | || |||||||| || || ||||| |||||||||| || Sbjct 2494 ACAAGCTCGGCGAGGTGGTCAAGGAATTTGACGCCATCCTCAAGCCGGACGAATCAAGCC 2435 Query 36500 CGATCATCTACCTCGGGACCCCACAGACTGAAATGACCCTTTAC 36543 || | |||||||||||||| ||| ||| |||||||| Sbjct 2434 GCATTTTGTACCTCGGGACCCCCCAGTGTGAGGACTCCCTTTAC 2391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130874252601120