Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq68136 84.2 3e-11 >seq68136 Length=112359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605 ||| ||||| || || ||||| || | || | |||||| || | ||| || | || Sbjct 34618 TATCATGATCACTTACCCATCCACCAACGGAATCTTTGAAGAAAGCGTCAAGGAGGTCTG 34559 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 |||| || || | ||| |||||||| || | || || || || | || || || Sbjct 34558 CGAGATCGTCCACAAATTTGGCGGTCAGGTTTACATGGACGGCGCCAACATGAACGCCCA 34499 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATA 159724 || ||| | ||| | || ||| ||| | ||||||| |||||| || || || | Sbjct 34498 AGTCGGTTTGTGTCGACCGGGAGA-TATCGGTTCCGATGTATCTCATCTTAATTTGCACA 34440 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||| ||||| |||||||||||||| ||||| ||||| ||||| || || || Sbjct 34439 AGACGTTCTGCATTCCACATGGAGGAGGAGGACCTGGATGTGGTCCCATCGGAGT 34385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587494785954560