Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq36167 120 4e-22 seq23060 102 1e-16 >seq36167 Length=11854 Score = 120 bits (132), Expect = 4e-22 Identities = 194/279 (70%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 197437 CCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCC 197496 || |||| |||| || ||||| ||||||||||| || ||||| | || || |||||| Sbjct 8609 CCATTCAAATACAGCAAATCAAACGCAAAGACGCAAACTTGGACCTTGATGTCCTCTTCC 8550 Query 197497 TTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCA 197556 ||| ||||||| | ||||| || |||| || || || ||||||| |||||||| Sbjct 8549 TTGGCATCTTTCCTCTTTCTTGTGCTCAGCACCTGGAATGGTTGGATCTGTTTCTTCTCC 8490 Query 197557 ACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGAT 197616 | || | || |||| || | || | |||| ||||||| || | || || || Sbjct 8489 AAATCATACGCCACTGATTCTGAATCGATGATGCAAGACTTGACCTCGTCTCCGAGGGAC 8430 Query 197617 TGGGGAAGCCTATTGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTTGCGGCTA 197676 | ||||| || ||||| ||||| ||||| || |||||| | ||| ||| |||||| Sbjct 8429 TTGGGAATTCTTTTGATGATGTCTGGGTATTTGGAGGTGTTGTCTTCTTGGTTTCGGCTA 8370 Query 197677 AAAATTCTAATCTTCCCTCCCTCCATGTAGTGAATCTGA 197715 | ||||| || | ||| |||| | || |||||| Sbjct 8369 TAGATTCTCATGTCTCCTGATTCCAATAAATGGATCTGA 8331 >seq23060 Length=29755 Score = 102 bits (112), Expect = 1e-16 Identities = 191/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 197435 CTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTT 197494 |||| |||| |||| || ||||| ||||||||||| || ||||| | || ||||| | Sbjct 2974 CTCCATTCAAATACAGCAAATCAAATGCAAAGACGCAAACTTGGACCTTGATATCTTCCT 2915 Query 197495 CCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCT 197554 ||||| | ||||| | || || || |||| || || || ||||||| ||||||| Sbjct 2914 CCTTGGCGTCTTTCCTCTTCCTTGTGCTCAGCACCTGGAATGGTTGGATCTGTTTCTTCT 2855 Query 197555 CAACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCG 197614 | | || | || |||| || | || | || | ||||||| || | || | | Sbjct 2854 CCAAATCATACGCCACTGATTCCGAATCGATGACGCAAGACTTGACATCGTCTCCAAGGG 2795 Query 197615 ATTGGGGAAGCCTATTGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTTGCGGC 197674 | | ||||| || ||||| ||||| ||||| || |||||| | ||| ||| |||| Sbjct 2794 ACTTGGGAATTCTTTTGATGATGTCTGGGTATTTGGAGGTGTTGTCTTCTTGGTTTCGGC 2735 Query 197675 TAAAAATTCTAATCTTCCCTCCCTCCATGTAGTGAATCTGA 197715 || | | ||| | | ||| ||||| | || |||||| Sbjct 2734 TATAGACTCTCACATCGCCTGACTCCAATAAATGGATCTGA 2694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676089278452480