Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq70036 96.9 6e-15 seq72101 93.3 8e-14 seq73110 84.2 4e-11 >seq70036 Length=130556 Score = 96.9 bits (106), Expect = 6e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | |||||| | | | |||||||| | ||| |||||||| ||||||| || Sbjct 53203 TCATCTCTGCTGATCAACTCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTC 53144 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 | |||||| || || || || || || ||||| ||||||||||| || || ||||| || Sbjct 53143 AACCAGAAGATAGCAGCAAAGGAACCCGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCA 53084 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 | | || || || | || || | | | ||||||| || ||||| |||||| Sbjct 53083 ACCACTCGTTCACCAAACGTGGCATTGTCGGCGTTGATCCAGTTGAGTGCCCAATCTGCC 53024 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 |||| |||| |||||| ||||| || || |||||| Sbjct 53023 TTCTGTTTGACTGGTGGCATAGTCTCAATTGCATTGAAGAG 52983 >seq72101 Length=85746 Score = 93.3 bits (102), Expect = 8e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | |||||| | | | |||||||| | ||| |||||||| ||||||| || Sbjct 42105 TCATCTCTGCTGATCAACTCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTC 42164 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 | |||||| || || || || || || ||||| ||||||||||| || || ||||| || Sbjct 42165 AACCAGAAGATAGCAGCAAAGGAACCTGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCA 42224 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 | | || || || | || || | | ||||||| || ||||| |||||| Sbjct 42225 ACCACTCGTTCACCAAACGTGGCATTGTCAGCATTGATCCAGTTGAGTGCCCAATCTGCC 42284 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 |||| |||| |||||| ||||| || || |||||| Sbjct 42285 TTCTGTTTGACTGGTGGCATAGTCTCAATTGCATTGAAGAG 42325 >seq73110 Length=95932 Score = 84.2 bits (92), Expect = 4e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 || ||||| || || || || ||||||||||||| |||||| |||||| ||| ||||| Sbjct 36206 TTGACTTTATCTTCAAGACGTGCGATGCGTTCCAACTTGCGCTTGCGGCACTTGCTGGCT 36265 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | | ||||| | | ||||||| || || ||||| | ||| || ||||| ||| Sbjct 36266 GCTACTCTGTTCCTCAATTTCTTACGCTCAGCTTTGATCCTTTCTTGCGTTTCCATATCG 36325 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 36326 ATAGGTGAC 36334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930651383664640