Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq70036 113 8e-20 seq72101 104 4e-17 >seq70036 Length=130556 Score = 113 bits (124), Expect = 8e-20 Identities = 132/176 (75%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| | || ||||||||| | | | || |||||||| || || |||| || || Sbjct 53031 TGGGCACTCAACTGGATCAACGCCGACAATGCCACGTTTGGTGAACGAGTGGTTGCTTTC 53090 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || ||||| ||||||||||||||| ||||| ||||| || ||||||||| | ||| || Sbjct 53091 GCCGCTGTCGAGGGCATCTTTTTCTCGGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAG 53150 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGG 26008 | ||| |||| || || | ||||| ||||| ||| | |||||||| || |||| Sbjct 53151 AGGGGTGTCATG-CCAGGTTTAACTTTCTCCAATGAGTTGATCAGCAGAGATGAGG 53205 Score = 102 bits (112), Expect = 2e-16 Identities = 128/174 (74%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 25472 AAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTG 25531 |||| || ||| |||||||||||||| | ||| |||||| | ||| ||| | | Sbjct 51438 AAGACATCTGGCTCATGTACAAGAAGGCAGAGGCGTCATTCTGGACAGTCGAGGAGGTGG 51497 Query 25532 ATCTGGCCAAGGACATGGACGGCTGGTAC--GCTCTATCCAAAGACGAGCAGCATTTTCT 25589 ||||| |||||||||||| ||| || |||| | ||| |||||| |||| ||| | Sbjct 51498 ATCTGTCCAAGGACATGGGTCATTGGGACAAGCTCAA--CAAGGACGAGAAGCACTTTAT 51555 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT 25643 | | |||||||| |||||||| ||| |||||| || || ||||||||||| Sbjct 51556 TTCGCATGTGTTGGCGTTCTTTGCTGCCAGTGATGGCATCGTCAACGAGAATCT 51609 >seq72101 Length=85746 Score = 104 bits (114), Expect = 4e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923 || |||||||| || || |||| || || || ||||| ||||||||||||||| ||| Sbjct 42247 GCCACGTTTGGTGAACGAGTGGTTGCTTTCGCCGCTGTCGAGGGCATCTTTTTCTCAGGT 42188 Query 25924 TCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TC 25982 || ||||| || ||||||||| | ||| ||| ||| |||| || || | ||||| || Sbjct 42187 TCCTTTGCTGCTATCTTCTGGTTGAAGAAGAGGGGTGTCATG-CCAGGTTTAACTTTCTC 42129 Query 25983 CAACGAGCTCATCAGCAGGGACGAGG 26008 ||| ||| | |||||||| || |||| Sbjct 42128 CAATGAGTTGATCAGCAGAGATGAGG 42103 Score = 93.3 bits (102), Expect = 8e-14 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 25472 AAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTG 25531 |||| || ||| |||||||||||||| | ||| |||||| | ||| || | | Sbjct 44607 AAGACATCTGGCTCATGTACAAGAAGGCAGAGGCGTCATTCTGGACAGTCGAGGAAGTGG 44548 Query 25532 ATCTGGCCAAGGACATGGACGGCTGGTAC--GCTCTATCCAAAGACGAGCAGCATTTTCT 25589 ||||| |||||||||||| ||| || |||| | ||| |||||| |||| ||| | Sbjct 44547 ATCTGTCCAAGGACATGGGTCATTGGGACAAGCTCAA--CAAGGACGAGAAGCACTTTAT 44490 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT 25643 | |||||||| |||||||| ||| |||||| || || ||||||||||| Sbjct 44489 TTCACATGTGTTGGCCTTCTTTGCTGCCAGTGATGGCATCGTTAACGAGAATCT 44436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927965927050240