Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq39745 104 1e-17 >seq39745 Length=16847 Score = 104 bits (114), Expect = 1e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||||||| ||| || || || | ||||| |||||||||||||||||||| || || || Sbjct 4090 CCAATCACCATCCTGTTCTACCCTTTCCATGAATAAATCTGGAATCCACATAGCGTAGAA 4031 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| | || || | |||||| |||| |||||||| ||| ||||| || | Sbjct 4030 AAGATCGCGAGCCCTGTTCTCTTCTGATCCGGTGTTCTTTTTACAATCCAAGAACTCGTA 3971 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 ||||||| ||||| ||||| | |||||| |||||| Sbjct 3970 GATATCTGCATGCCAAGGTTCAAGATAGATGGCAAAA 3934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252806559213200