Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq68136 93.3 5e-14 seq24666 86.0 7e-12 >seq68136 Length=112359 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || || ||||| ||||| ||||| |||||||||||||| ||||| ||||| || Sbjct 34385 ACTCCGATGGGACCACATCCAGGTCCTCCTCCTCCATGTGGAATGCAGAACGTCTTGTGC 34444 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 ||||| |||||| ||||||| | ||| ||| || | ||| | ||| || || || Sbjct 34445 AAATTAAGATGAGATACATCGGAACCGATA-TCTCCCGGTCGACACAAACCGACTTGGGC 34503 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 || | || || || || | || |||||||| ||| | || ||||||| || | Sbjct 34504 GTTCATGTTGGCGCCGTCCATGTAAACCTGACCGCCAAATTTGTGGACGATCTCGCAGAC 34563 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA 138416 || ||| | || |||||| | || | || ||||| || || ||||| ||| Sbjct 34564 CTCCTTGACGCTTTCTTCAAAGATTCCGTTGGTGGATGGGTAAGTGATCATGATA 34618 >seq24666 Length=54347 Score = 86.0 bits (94), Expect = 7e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| || || ||||| |||||||||||||| ||||| ||||| || Sbjct 8875 ACTCCAATGGGACCACATCCTGGTCCTCCTCCTCCATGTGGAATGCAGAACGTCTTGTGC 8934 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 ||||| |||||| |||| || | ||| ||| || | ||| | ||| || || || Sbjct 8935 AAATTAAGATGAGATACGTCGGAACCGATA-TCTCCCGGTCGACACAAACCGACTTGGGC 8993 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 || | || || || || | || |||||||| ||| | || ||||||| || | Sbjct 8994 GTTCATGTTGGCTCCGTCCATGTAAACCTGACCGCCAAATTTGTGGACGATCTCGCAGAC 9053 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 || ||| | || |||||| | || | || ||||| || || ||||| || Sbjct 9054 CTCCTTGACGCTTTCTTCAAAGATTCCGTTGGTGGATGGGTAAGTGATCATGAT 9107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578450551713920