Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq39745 95.1 1e-14 seq8201 95.1 1e-14 >seq39745 Length=16847 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 ||||||| || || |||| |||||| | | || | ||||||||||| | | Sbjct 13131 GACTGGGCTGCCCTTAAGGCCGAGATCAAGAAACATGGCGTACGTAACAGTCTACTATTA 13190 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 ||||| ||||| || ||||| ||||| |||||| ||||||| |||||| | ||||| || Sbjct 13191 GCACCCATGCCTACTGCCTCAACCGCCCAAATCCTGGGTAACAATGAAGCCATTGAAGCA 13250 Query 76571 TACACAACAAACATCTACCTGAGAAGA 76597 ||||| | ||||||||| |||||| Sbjct 13251 TACACCAGCAACATCTACACAAGAAGA 13277 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 ||||| || | || || ||||| ||||| ||| ||| || | ||||||||| ||| || Sbjct 5887 GAGACAGGGAACCCTTACATGCTGTACAAAGATCATTGCAATAGGAAGAGTAATCAACAG 5946 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 || ||||||| ||||| | ||||||||||| ||||| |||| ||||| ||| Sbjct 5947 AACCTGGGAACCATCAAATGTAGTAATCTTTGCACTGAAATAGTAGAATACACCAGTAAA 6006 Query 76025 GATGAG 76030 |||||| Sbjct 6007 GATGAG 6012 >seq8201 Length=93372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 ||||||| || || |||| |||||| | | || | ||||||||||| | | Sbjct 59317 GACTGGGCTGCCCTTAAGGCCGAGATCAAGAAACATGGCGTACGTAACAGTCTACTATTA 59258 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 ||||| ||||| || ||||| ||||| |||||| ||||||| |||||| | ||||| || Sbjct 59257 GCACCCATGCCTACTGCCTCAACCGCCCAAATCCTGGGTAACAATGAAGCCATTGAAGCA 59198 Query 76571 TACACAACAAACATCTACCTGAGAAGA 76597 ||||| | ||||||||| |||||| Sbjct 59197 TACACCAGCAACATCTACACAAGAAGA 59171 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 ||||| || | || || ||||| ||||| ||| ||| || | ||||||||| ||| || Sbjct 62865 GAGACGGGGAACCCTTACATGCTGTACAAAGATCATTGCAATAGGAAGAGTAATCAACAG 62806 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 || ||||||| ||||| | ||||||||||| ||||| |||| ||||| ||| Sbjct 62805 AACCTGGGAACCATCAAATGTAGTAATCTTTGCACTGAAATAGTAGAATACACCAGTAAA 62746 Query 76025 GATGAG 76030 |||||| Sbjct 62745 GATGAG 62740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596005125844480