Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11888 120 4e-21 seq31087 113 5e-19 seq30373 113 5e-19 seq25259 113 5e-19 seq13541 113 5e-19 seq23933 105 8e-17 seq75374 104 3e-16 seq70036 100 3e-15 >seq11888 Length=38286 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || ||||| |||||||||| ||| || ||| || Sbjct 16710 GCTTGGCCAGCTCACCGGGCAGAATAAGACGCACAGCGGTCTGGACCTCACGGCTGCTGA 16651 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| ||| |||| |||| || || ||||||| |||| | Sbjct 16650 TGGTTGACTTCTTGTTGTAGTTTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAAGA 16591 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||||||| |||||||| ||| | |||| ||||||| || ||| |||| Sbjct 16590 TATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCGGTGTCTGGGT 16531 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||||||||||||| Sbjct 16530 GCACTTGTTTGAGCACCTTGTAGATG 16505 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| |||| ||| || ||| || Sbjct 28435 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 28494 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| ||| |||| ||| || || ||||||| |||| | Sbjct 28495 TGGTTGACTTCTTGTTGTAGTTTGCCAAACGAGAAGCTTCACCAGCGATGCGCTCGAAGA 28554 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||||||| |||||||| ||| | |||| ||||||| || ||| |||| Sbjct 28555 TATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGGGT 28614 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||||||||||||| Sbjct 28615 GCACTTGTTTGAGCACCTTGTAGATG 28640 Score = 100 bits (110), Expect = 3e-15 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | || ||||| ||||| |||| ||| || ||| || Sbjct 4674 GCTTGGCCAGCTCACCGGGTAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 4733 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| ||| || | |||| || || ||||||| |||| Sbjct 4734 TGGT--TGCCTTCTTGTTGTAGTTGGCTAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 4791 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || || |||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 4792 GATATCATTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGG 4851 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 4852 GTGCACTTGTTTGAGCACCTTGTAGATG 4879 >seq31087 Length=20691 Score = 113 bits (124), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| || ||||||| |||||| ||| || Sbjct 20510 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCTGTCTGGACCTCGCGGCTGCTGA 20451 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| ||| |||| ||| || || ||||||| |||| Sbjct 20450 TGGT--TGCCTTCTTGTTGTAGTTGGCCAAGCGGGAAGCTTCACCAGCGATGCGCTCGAA 20393 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 20392 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCGGTGTCTGG 20333 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 20332 GTGCACTTGTTTGAGCACCTTGTAGATG 20305 Score = 100 bits (110), Expect = 3e-15 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| |||| ||| || ||| || Sbjct 4117 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 4176 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 || |||| |||||| ||| |||| |||| || || | ||||| |||| Sbjct 4177 -CG-GTTGACTTCTTGTTGTAGTTTGCCAAACGGGAAGCTTCACCAGCAATGCGCTCGAA 4234 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 4235 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGG 4294 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||| || |||||||||||||||||| Sbjct 4295 ATGCACTTGTTTGAGCACCTTGTAGATG 4322 >seq30373 Length=28211 Score = 113 bits (124), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| |||| ||| || ||| || Sbjct 8576 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 8635 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| || | |||| |||| || || ||||||| |||| Sbjct 8636 TGGT--TGCCTTCTTGTTGTAGAGTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 8693 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 8694 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGG 8753 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 8754 GTGCACTTGTTTGAGCACCTTGTAGATG 8781 Score = 100 bits (110), Expect = 3e-15 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| || | ||| || ||| || Sbjct 15171 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGAACCTCACGGCTGCTGA 15230 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| || | |||| |||| || || ||||||| |||| Sbjct 15231 TGGT--TGCCTTCTTGTTGTAGAGTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 15288 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | ||| ||||||| || ||| || Sbjct 15289 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCTTTGCTGGAGATACCAGTGTCTGG 15348 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||| || |||||||||||||||||| Sbjct 15349 ATGCACTTGTTTGAGCACCTTGTAGATG 15376 >seq25259 Length=23712 Score = 113 bits (124), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| |||| ||| || ||| || Sbjct 8045 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 8104 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| || | |||| |||| || || ||||||| |||| Sbjct 8105 TGGT--TGCCTTCTTGTTGTAGAGTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 8162 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 8163 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCGGTGTCTGG 8222 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 8223 GTGCACTTGTTTGAGCACCTTGTAGATG 8250 Score = 113 bits (124), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || || || ||||| |||| ||| || ||| || Sbjct 18385 GCTTGGCCAGCTCACCGGGCAGAATAAGACGAACAGCGGTTTGGACCTCACGGCTGCTGA 18326 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| ||| |||| |||| || || ||||||| |||| Sbjct 18325 TGGT--TGCCTTCTTGTTGTAGTTGGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 18268 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 18267 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCGGTGTCTGG 18208 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 18207 GTGCACTTGTTTGAGCACCTTGTAGATG 18180 >seq13541 Length=32405 Score = 113 bits (124), Expect = 5e-19 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| |||||||||| |||||| ||| || Sbjct 22342 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTCTGGACCTCGCGGCTGCTGA 22283 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 || |||| |||||| ||| |||| ||| || || ||||||| |||| Sbjct 22282 -CG-GTTGACTTCTTGTTGTAGTTGGCCAAGCGGGAAGCTTCACCAGCGATGCGCTCGAA 22225 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 22224 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCGGTGTCTGG 22165 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||||||||||||| Sbjct 22164 GTGCACTTGTTTGAGCACCTTGTAGATG 22137 Score = 104 bits (114), Expect = 3e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || ||| ||| | || ||||| ||||| |||||||| || ||| || || | Sbjct 4029 GCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGATCTCACGGCTGCTGA-CG-G 4086 Query 1254408 TTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 ||| |||||| ||| |||| |||| || || | ||||| |||| || | Sbjct 4087 TTGACTTCTTGTTGTAGTTTGCCAAACGGGAAGCTTCACCAGCAATGCGCTCGAAGATAT 4146 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| |||||||| ||| | |||| ||||||| || ||| ||||||| Sbjct 4147 CGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATCCCAGTGTCTGGGTGCA 4206 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 | || |||||||||||||||||| Sbjct 4207 CTTGTTTGAGCACCTTGTAGATG 4229 >seq23933 Length=37782 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || || || ||||| |||| ||| || ||| || Sbjct 13061 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGAACAGCGGTTTGGACCTCACGGCTGCTGA 13002 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| ||| |||| |||| || || ||||||| |||| | Sbjct 13001 TGGTTGACTTCTTGTTGTAGTTTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAAGA 12942 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||||||| |||||||| ||| | |||| ||||||| || ||| |||| Sbjct 12941 TATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGGGT 12882 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||||||||||||| Sbjct 12881 GCACTTGTTTGAGCACCTTGTAGATG 12856 Score = 100 bits (110), Expect = 3e-15 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || ||||| ||||| |||| ||| || ||| || Sbjct 36914 GCTTGGCCAGCTCACCGGGCAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 36973 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| || | |||| |||| || || ||||||| |||| Sbjct 36974 TGGT--TGCCTTCTTGTTGTAGAGTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 37031 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||| ||||| |||||||| ||| | ||| ||||||| || ||| || Sbjct 37032 GATATCGTTTACAAAGCTGTTCATGATGCTCATGGCTTTGCTGGAGATACCAGTGTCTGG 37091 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||| || |||||||||||||||||| Sbjct 37092 ATGCACTTGTTTGAGCACCTTGTAGATG 37119 >seq75374 Length=160136 Score = 104 bits (114), Expect = 3e-16 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | || ||||| ||||| |||| ||| || ||| || Sbjct 147349 GCTTGGCCAGCTCACCGGGGAGAAGAAGACGCACAGCGGTTTGGACCTCACGGCTGCTGA 147290 Query 1254403 TCGTGTTGCG--CTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || ||| |||||| || | |||| |||| || || ||||||| |||| Sbjct 147289 TGGT--TGCCTTCTTGTTGTAGAGTGCCAAACGGGAAGCTTCACCAGCGATGCGCTCGAA 147232 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 || ||||||||||| |||||||| ||| | |||| ||||||| || ||| || Sbjct 147231 GATATCGTTGACAAAGCTGTTCATGATGCTCATGGCCTTGCTGGAGATACCAGTGTCTGG 147172 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || |||||||| ||||||||| Sbjct 147171 GTGCACTTGTTTGAGCACTTTGTAGATG 147144 >seq70036 Length=130556 Score = 100 bits (110), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 869717 AGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAG 869776 || |||||| |||||||| || ||||| || || || |||| || ||| |||||| Sbjct 51609 AGATTCTCGTTGACGATGCCATCACTGGCAGCAAAGAACGCCAACACATGCGAAATAAAG 51550 Query 869777 TGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCGGCGCTGAGGTCCACCTCC 869836 || |||||| | | ||||| |||| || | |||| | || ||||||||| Sbjct 51549 TGCTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACCTCC 51490 Query 869837 TCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGGTAGCGG 869896 ||| | ||||||| || ||||| ||||| |||||||| ||| | | ||| | || Sbjct 51489 TCGACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAATTGG 51430 Query 869897 ATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTCG 869944 || ||||||| |||||| || ||| || || | | ||||||||| Sbjct 51429 ATTGGGAAGATGACAAATCGACGGGGATTCTCTCTAAGTAGGGGTTCG 51382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100927231755632