Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1757 113 3e-20 seq1554 113 3e-20 >seq1757 Length=74305 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| ||||| || | |||| |||| || ||||||||||| || || Sbjct 30241 CTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAA 30300 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||| ||| | || | || || ||||| | || ||| ||| || Sbjct 30301 GATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATT 30360 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | | || || |||| ||| |||||||| || ||||||||||| || Sbjct 30361 TTCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGAC 30420 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 30421 GAAGATTTGCAT 30432 Score = 107 bits (118), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || || | ||| |||||||| ||||| ||||| || | |||| |||| Sbjct 33012 CAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATC 33071 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||||||||| || ||||| || |||||||| ||| | || | ||||||||||| Sbjct 33072 TTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTC 33131 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || ||| || || || || | ||| | | || || |||| ||| || Sbjct 33132 TTGGATCTTGGCTTTCAC--ATTCTCGATTGTGTCACTTGGTTCCACCTCAAGGGTGATA 33189 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || || || |||||||||||||| Sbjct 33190 GTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 33224 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| || || || ||| |||| |||| || ||||||||||| |||||| Sbjct 23186 TCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAG 23245 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || |||||||| ||| | || | || |||||||| | || ||| ||| || | Sbjct 23246 ATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTT 23305 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 | || | ||| | | || || |||| ||| ||||||| Sbjct 23306 TCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCT 23345 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || | |||| |||| || ||||||||||| |||||| Sbjct 30895 TCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAG 30954 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| ||| | || | || |||||||| Sbjct 30955 ATAAGACGTTGCTGATCTGGGGGGATGCCTTCCTTGTC 30992 >seq1554 Length=107351 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || || | ||| |||||||| ||||| |||||||| | |||| |||| Sbjct 8230 CAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGACAATGTGCGGCCATC 8171 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||||||||| || ||||| || |||||||| ||| | || | ||||||||||| Sbjct 8170 TTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTC 8111 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || ||| || || || || | ||| | | || || |||| ||| || Sbjct 8110 TTGGATCTTGGCTTTCAC--ATTCTCAATTGTGTCACTTGGTTCCACCTCAAGGGTGATA 8053 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || || || |||||||||||||| Sbjct 8052 GTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 8018 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| ||||| || | |||| |||| || ||||||||||| || || Sbjct 10264 CTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAA 10205 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||| ||| | || | || || ||||| | || ||| ||| || Sbjct 10204 GATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATT 10145 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | | || || |||| ||| |||||||| || ||||||||||| || Sbjct 10144 TTCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGAC 10085 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 10084 GAAGATTTGCAT 10073 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| || || || ||| |||| |||| || ||||||||||| |||||| Sbjct 13387 TCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAG 13328 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||| ||| | || | || || || || | || || ||| || | Sbjct 13327 ATCAAACGTTGCTGATCTGGGGGGATGCCTTCTTTATCTTGGATCTTAGCTTTTACATTT 13268 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | | || || |||| ||| |||||||| || ||||||||||| || Sbjct 13267 TCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACG 13208 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 13207 AAGATTTGCAT 13197 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| |||||||| ||||| ||||| || | |||| |||| || Sbjct 16516 ACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTCA 16457 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||||||||| |||||||||| |||||||| ||| | || | || |||||||| Sbjct 16456 AGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTCCTTGTC 16401 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| || || | ||| ||| ||||||||||| ||||| || | |||| |||| Sbjct 10057 CAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGACAATGTGCGGCCATC 9998 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||||||||| |||||||| || |||||||| ||| | || | || || ||||| Sbjct 9997 TTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTC 9938 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | |||| |||| || ||||||||||| |||||| Sbjct 13159 TCCTTTTGAATGTTGTAGTCTGACAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAG 13100 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||||| ||| | || | || |||||||| Sbjct 13099 ATCAAACGTTGCTGATCTGGGGGGATGCCTTCCTTGTC 13062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325392333735824