Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1554 125 1e-23 seq1757 111 2e-19 >seq1554 Length=107351 Score = 125 bits (138), Expect = 1e-23 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || || || ||||| |||| || |||| | | Sbjct 13198 TGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGTG 13257 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| ||| || ||| |||||||||||| || || ||||| | Sbjct 13258 ACACTATTGAAAATGTAAAAGCTAAGATCCAAGATAAAGAAGGCATCCCCCCAGATCAGC 13317 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || || || ||| | || ||| | | || | ||||||| || | Sbjct 13318 AACGTTTGATCTTCGCTGGAAAGCAACTTGAAGATGGTCGCACCCTTTCAGATTACAACA 13377 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTG 146270 | ||||| ||||| ||| ||||| | || || || || | || ||| ||||||| ||| Sbjct 13378 TCCAAAAGGAATCAACTCTCCATCTTGTCTTGCGTCTACGTGGTGGTCAATAAATCTTG 13436 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || || || ||||| |||| || |||| | | Sbjct 10074 TGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGTG 10133 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| || || ||| ||||||||||| || || ||||| | Sbjct 10134 ACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGC 10193 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| || || ||| | || ||| | || || |||| || || | Sbjct 10194 AACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAACA 10253 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || ||||| || ||| ||||| | || || || Sbjct 10254 TCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCG 10287 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 146056 CAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATA 146115 |||| ||||| || || |||| ||||||| | ||| || ||| | |||||||| | | Sbjct 17849 CAGGTAAAACCATAACCCTTGAGGTAGAACCAAGCGACACAATTGAGAATGTAAAGACCA 17908 Query 146116 AAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAAC 146175 |||| ||| || ||||||||||| || ||||| ||| | || || || || || |||| Sbjct 17909 AAATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAAC 17968 Query 146176 AATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATT 146235 || | || ||| | || || | || || || || ||||| ||||| || ||||| Sbjct 17969 AACTTGAAGATGGCCGCACATTGTCCGACTACAACATTCAAAAGGAATCAACCCTCCATC 18028 Query 146236 TAGTATTACG 146245 | || || || Sbjct 18029 TTGTCTTGCG 18038 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 146056 CAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATA 146115 |||| ||||| || || |||| ||||||| | || || ||| | ||||| || || Sbjct 9870 CAGGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTA 9929 Query 146116 AAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAAC 146175 | || ||| ||||||||||| || || ||||| ||| | ||||| || || || || | Sbjct 9930 AGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTCATCTTCGCTGGAAAGC 9989 Query 146176 AATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATT 146235 || | || ||| | || || |||| || || || || ||||| || ||| ||||| Sbjct 9990 AACTTGAAGATGGCCGCACATTGTCAGACTACAACATTCAGAAAGAGTCCACTCTCCATC 10049 Query 146236 TAGTATTACG 146245 | || || || Sbjct 10050 TTGTCTTGCG 10059 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 146056 CAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATA 146115 |||| ||||| || || |||| ||||||| | ||||| ||| | ||||| || || Sbjct 10747 CAGGCAAAACTATCACCCTTGAGGTAGAACCAAGTGATACCATTGAGAATGTCAAGGCTA 10806 Query 146116 AAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAAC 146175 | || ||| ||||||||||| || || ||||| ||| | || || || || || || | Sbjct 10807 AGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGC 10866 Query 146176 AATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATT 146235 || | || ||| | || || |||| || || || || ||||| || ||| ||||| Sbjct 10867 AACTTGAAGATGGCCGTACATTGTCAGACTACAACATCCAGAAAGAGTCCACTCTCCATC 10926 Query 146236 TAGTATTACG 146245 | || || || Sbjct 10927 TCGTCTTGCG 10936 >seq1757 Length=74305 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 146064 ACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAAAATACAA 146123 || ||||| |||| || |||| | || |||||| ||||||||||| || || ||| Sbjct 23343 ACCATTACCCTTGAGGTTGAACCAAGTGACACTATTGAAAATGTAAAAGCAAAGATCCAA 23284 Query 146124 CTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGAT 146183 || ||||||||||| || ||||| ||| | || || || || || || ||| | || Sbjct 23283 GACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGCAACTTGAA 23224 Query 146184 GATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTA 146243 ||| | | || | ||||||| || || ||||| ||||| ||| ||||| | || || Sbjct 23223 GATGGTCGCACCCTTTCAGATTACAACATCCAAAAGGAATCAACTCTCCATCTTGTCTTG 23164 Query 146244 CGATTAAGAGGAGGTAAATAAATATT 146269 || ||| | || ||| ||||||| || Sbjct 23163 CGTTTACGTGGTGGTCAATAAATCTT 23138 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || || || ||||| |||| || |||| | | Sbjct 30431 TGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGTG 30372 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| || || ||| ||||||||||| || || ||||| | Sbjct 30371 ACACTATTGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGC 30312 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| || || ||| | || ||| | || || |||| || || | Sbjct 30311 AACGTCTTATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAACA 30252 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || ||||| || ||| ||||| | || || || Sbjct 30251 TCCAGAAAGAGTCTACTCTCCATCTTGTCTTGCG 30218 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 146056 CAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATA 146115 |||| ||||| || || |||| ||||||| | |||||| ||| | |||||||| | | Sbjct 25379 CAGGTAAAACTATCACCCTTGAGGTAGAACCAAGCGATACAATTGAGAATGTAAAGACCA 25320 Query 146116 AAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAAC 146175 |||| ||| || ||||||||||| || ||||| ||| | | || || || || |||| Sbjct 25319 AAATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTTTGATCTTCGCTGGAAAAC 25260 Query 146176 AATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATT 146235 || | || ||| | || || | || || || || ||||| || || ||| ||||| Sbjct 25259 AACTTGAAGATGGCCGTACATTGTCCGACTACAACATTCAAAAGGAGTCTACTCTCCATC 25200 Query 146236 TAGTATTACG 146245 | || || || Sbjct 25199 TTGTCTTGCG 25190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785422529352320