Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_023548.1 Length=39651 Score E Sequences producing significant alignments: (Bits) Value seq54356 102 2e-17 >seq54356 Length=14911 Score = 102 bits (112), Expect = 2e-17 Identities = 227/338 (67%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 37260 ACCCAGACCTGAAGTTCATGATTGTGTCTGCCTCTAAGGAACGTGCAGATGCTAACTCCA 37319 |||| || |||||| ||||| |||| || ||||| ||||| || || ||| ||||| Sbjct 2782 ACCCTGAGCTGAAGATCATGGTTGTCTCGGCCTCCAAGGACCGCGCTGATCAATTCTCCA 2723 Query 37320 TCTTTATCAAACGTATCATCGACATGCTCCCGTACCTGCATGAGTTGAAACCTAAAGCTG 37379 |||| | | ||| | |||| ||| || ||| | | | ||||| || | | Sbjct 2722 CATTTACCCAGCGTCTGATCGCTGAGCTGCCTGGCCTCGAGCATCTAAAACCCAAGGGGG 2663 Query 37380 GACAGCGAGACTCCGTTATCAGCTTTGACGTTGGGTTAGCCAAACCAGACCACTCACCTT 37439 ||| || ||||| ||| ||||| |||||| ||||| | ||||| || | Sbjct 2662 ACCAGAGAAACTCCAAGATCGCATTTGATGTTGGGCCCGCCAAGGCGTCTCACTCGCCCT 2603 Query 37440 CCGTGAAGTCTGTGGGTATCACTGGTCAGTTGACTGGTAGCCGTGCTGACATCCTGATTG 37499 | || || ||||| || || || || ||| |||| || |||||||| | ||||| | Sbjct 2602 CAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGATCTGCTGATCG 2543 Query 37500 CTGATGACGTCGAGGTTCCAAACAACAGTGCGACTCAGGCTGCTCGTGGGCGA-CTCAGT 37558 |||||||||| ||||| | |||||| || || || || | || | | ||| | Sbjct 2542 CTGATGACGTTGAGGTCCTGAACAACGCCGCAACCCA-GCAAATGCGGGACAAGCTCGGC 2484 Query 37559 GAGCTTGTGAAAGAGTTTGATGCTATCCTGAAGCCTGA 37596 ||| | || || || ||||| || ||||| ||||| || Sbjct 2483 GAGGTGGTCAAGGAATTTGACGCCATCCTCAAGCCGGA 2446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126647655265376