Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1757 136 4e-27 seq1554 136 4e-27 >seq1757 Length=74305 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | ||||| ||||| || |||||||| || | Sbjct 30206 CCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGAC 30265 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 30266 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGG 30325 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||||||||| || ||| ||||| | ||| | ||||| | ||||| || Sbjct 30326 ATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACC 30385 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| || | |||||||| || | || || ||||| ||||||||| Sbjct 30386 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 30433 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || ||||||||||| || | ||| | || ||||| ||||| ||||||||||| Sbjct 23147 TGACCACCACGTAAACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCT 23206 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | |||| ||||| ||||| || ||||| |||| |||||||||||||| || Sbjct 23207 GAAAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGG 23266 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| ||||| || ||| ||||| | ||| | ||||| | ||||| Sbjct 23267 GGAATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCA 23326 Query 137362 ACTTCAA 137368 || |||| Sbjct 23327 ACCTCAA 23333 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| || | ||| | ||| ||||| || || |||||||| || | Sbjct 32998 CCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAC 33057 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 33058 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 33117 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| || ||||| || || ||| | | || | ||||| | ||||| || Sbjct 33118 ATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTCTCGATTGTGTCACTTGGTTCCACC 33177 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | || ||||| || | |||||| || || || ||||| Sbjct 33178 TCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 33224 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | ||||| || ||||| |||||||| ||| | Sbjct 25178 CCACCACGCAGACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAC 25237 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| |||||||| ||||| |||||| |||||||||||| || || Sbjct 25238 AATGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGA 25297 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 25298 ATGCCTTCCTTGTC 25311 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||||| ||| ||||| || || |||||||| ||| | Sbjct 26446 CCACCACGGAGACGCAACACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAC 26505 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 26506 AATGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 26565 Query 137305 ATGCCTTCTTTGTC 137318 ||||| || ||||| Sbjct 26566 ATGCCCTCCTTGTC 26579 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| ||| | ||| | ||| ||||| || || |||||||| || | Sbjct 30859 CCACCACGGAGACGCAGAACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAC 30918 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || ||||| |||| |||||||||||||| || || Sbjct 30919 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGG 30978 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 30979 ATGCCTTCCTTGTC 30992 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||||| || || ||||| || |||||||| ||| | Sbjct 31926 CCACCACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 31985 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 31986 AATGTTCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGG 32045 Query 137305 ATGCCTTCTTTGTC 137318 || ||||||||||| Sbjct 32046 ATACCTTCTTTGTC 32059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | || || ||||| || |||||||| || | Sbjct 29547 CCACCACGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAC 29606 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| || || || ||||| |||| |||||||||||||| || || Sbjct 29607 AATGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGG 29666 Query 137305 ATGCCTTCTTTGTC 137318 || ||||||||||| Sbjct 29667 ATACCTTCTTTGTC 29680 >seq1554 Length=107351 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | ||||| ||||| || |||||||| || | Sbjct 10299 CCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGAC 10240 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 10239 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGG 10180 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||||||||| || ||| ||||| | ||| | ||||| | ||||| || Sbjct 10179 ATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACC 10120 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| || | |||||||| || | || || ||||| ||||||||| Sbjct 10119 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 10072 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || |||| |||||| || | ||| | || ||||| ||||| ||||||||||| Sbjct 13426 TGACCACCACGTAGACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCT 13367 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | |||| ||||| ||||| || ||||| |||||| |||||||||||| || Sbjct 13366 GAAAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGG 13307 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||||||||| || || || ||||| | ||| | ||||| | ||||| Sbjct 13306 GGGATGCCTTCTTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTGTCACTTGGTTCA 13247 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || |||| || | |||||||| || | || || ||||| ||||||||| Sbjct 13246 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 13196 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | || ||||| ||||| |||||||| ||| | Sbjct 18050 CCACCACGGAGACGCAAGACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGAC 17991 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| |||||||| ||||| |||| |||||||||||||| || || Sbjct 17990 AATGTGCGGCCATCTTCAAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGA 17931 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| ||||| |||| | || | ||||| | |||||||| Sbjct 17930 ATGCCTTCCTTGTCTTGGATTTTGGTCTTTACATTCTCAATTGTGTCGCTTGGTTCTACC 17871 Query 137365 TCAA 137368 |||| Sbjct 17870 TCAA 17867 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| || | ||| | ||| ||||| || || |||||||| || | Sbjct 8244 CCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAC 8185 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 8184 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGA 8125 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| || ||||| || || ||| | | || | ||||| | ||||| || Sbjct 8124 ATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCCACC 8065 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | || ||||| || | |||||| || || || ||||| Sbjct 8064 TCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 8018 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||||| ||| ||||| || || |||||||| || | Sbjct 16534 CCACCACGGAGACGCAACACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAC 16475 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || ||||| |||||| |||||||||||| || || Sbjct 16474 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGG 16415 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 16414 ATGCCTTCCTTGTC 16401 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | || || ||||| || |||||||| || | Sbjct 10071 CCACCACGGAGACGCAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGAC 10012 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || ||||| |||| |||||||||||||| || || Sbjct 10011 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGGGG 9952 Query 137305 ATGCCTTCTTTGTC 137318 |||||||||||||| Sbjct 9951 ATGCCTTCTTTGTC 9938 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| || || | ||| | |||||||| ||||| |||||||| || | Sbjct 13195 CCACCACGAAGACGTAATACAAGATGGAGGGTAGATTCCTTTTGAATGTTGTAGTCTGAC 13136 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||| || ||||| |||||| |||||||||||| || || Sbjct 13135 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGG 13076 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 13075 ATGCCTTCCTTGTC 13062 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||||| || || ||||| || |||||||| ||| | Sbjct 9321 CCACCACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9262 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 9261 AATGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGG 9202 Query 137305 ATGCCTTCTTTGTC 137318 || ||||||||||| Sbjct 9201 ATACCTTCTTTGTC 9188 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | ||| | || || ||||| || |||||||| || | Sbjct 10948 CCACCACGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAC 10889 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| ||||| || ||||| |||| |||||||||||||| || || Sbjct 10888 AATGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGG 10829 Query 137305 ATGCCTTCTTTGTC 137318 |||||||||||||| Sbjct 10828 ATGCCTTCTTTGTC 10815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488081739667200