Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_024362.1 Length=40472 Score E Sequences producing significant alignments: (Bits) Value seq54356 96.9 9e-16 >seq54356 Length=14911 Score = 96.9 bits (106), Expect = 9e-16 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 38335 TCGCCTTCGACGTGGGTCCAGCCAAGCCTGACCACTCGCCCTCTGTGAAGTCTGTAGGTA 38394 |||| || || || || || |||||| | ||||||||||| || || ||||| || | Sbjct 2644 TCGCATTTGATGTTGGGCCCGCCAAGGCGTCTCACTCGCCCTCAGTCAAATCTGTCGGCA 2585 Query 38395 TCACCGGTCAGTTGACTGGTAGCCGTGCTGACATCCTCATTGCGGACGACGTTGAGGTTC 38454 | || || ||| |||| || |||||||| | || || || || ||||||||||| | Sbjct 2584 TTACAGGCCAGATGACGGGCTCTCGTGCTGATCTGCTGATCGCTGATGACGTTGAGGTCC 2525 Query 38455 CCAACAACTCTGCCACTCAGACCGCCCGAGATCACCTCGGAGAACTGGTGAAGGAGTTCG 38514 |||||| | || || ||| || || | ||||| || |||| ||||| || | Sbjct 2524 TGAACAACGCCGCAACCCAGCAAATGCGGGACAAGCTCGGCGAGGTGGTCAAGGAATTTG 2465 Query 38515 ATGCGATCCTGAAGCCGG 38532 | || ||||| ||||||| Sbjct 2464 ACGCCATCCTCAAGCCGG 2447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129272493701568