Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq39745 107 5e-18 >seq39745 Length=16847 Score = 107 bits (118), Expect = 5e-18 Identities = 169/241 (70%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 ||||| |||||||| |||||||||||| ||||||| | || ||||| || | ||||| Sbjct 3935 TTTGCCATCTATCTTGAACCTTGGCATGCAGATATCTACGAGTTCTTGGA---TTGTAAA 3991 Query 110817 AATCAA---GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 || | |||| ||||| | || || || ||| | || || || ||||||||| || Sbjct 3992 AAGAACACCGGATCAGAAGAGAACAGGGCTCGCGATCTTTTCTACGCTATGTGGATTCCA 4051 Query 110874 GATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGT 110933 |||||||||||| || | || || | |||| |||| || ||||| || ||| Sbjct 4052 GATTTATTCATGGAAAGGGTAGAACAGGATGGTGATTGGTGCCTGATGTGCCCACATGAA 4111 Query 110934 TCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAA 110993 || ||||| || | || | ||||| || |||||||| || || ||| || ||| Sbjct 4112 TCCCCTGGATTACCCGACTGCTGGGGAAAGGAATTTGAAGAGCTATATACAAAGTAAGAA 4171 Query 110994 A 110994 | Sbjct 4172 A 4172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185661763671856