Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1757 113 3e-20 seq1554 113 3e-20 >seq1757 Length=74305 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || ||| || || || |||||||| || || Sbjct 32997 ACCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGA 33056 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | ||| ||||| ||||| || | ||| ||||||||| | || Sbjct 33057 CAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 33116 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || ||||| ||| || | ||||| |||| ||||| Sbjct 33117 AATGCCCTCCTTGTCTTGGATCTTGGCTTTCA-CATTCTCGATTGTGTCACTTGGTTCCA 33175 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| ||||| || |||| ||||| |||||||||||||| Sbjct 33176 CCTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 33224 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| ||||| |||||| || |||||||| || || Sbjct 30205 ACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGA 30264 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | ||| ||||| ||||| || | ||| ||||||||| | || Sbjct 30265 CAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 30324 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || || || |||| || | ||||| |||| ||| | Sbjct 30325 GATGCCTTCTTTGTCTTGGATCTT-TGCTTTTACATTTTCAATAGTGTCACTTGGTTCAA 30383 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || | || || || ||||| |||||| Sbjct 30384 CCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 30433 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| |||||| |||||| || |||||||| ||||| Sbjct 31925 ACCACCACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 31984 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | ||| ||||| || || || | ||||||||||||| | || Sbjct 31985 CAATGTTCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGG 32044 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | | ||||| || | ||||| |||| ||| | Sbjct 32045 GATACCTTCTTTGTCTTGGATCTT-AGCCTTAACATTCTCAATTGTGTCACTTGGTTCTA 32103 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | || | ||||| ||||| |||| Sbjct 32104 CTTCTAGGGTGATAGTTTTGCCTG 32127 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| |||||| |||||| || |||||||| || || Sbjct 29546 ACCACCACGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGA 29605 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | || ||||| || || || | ||| ||||||||| | || Sbjct 29606 CAATGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 29665 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | | |||| || | |||||| |||| ||| | Sbjct 29666 GATACCTTCTTTGTCTTGGATCTT-AGCCTTGACATTCTCAATGGTGTCACTTGGTTCTA 29724 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | |||| ||||| ||||| |||| Sbjct 29725 CCTCAAGGGTGATAGTTTTGCCTG 29748 Score = 86.0 bits (94), Expect = 4e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||||| || || | ||| ||||| || ||||| ||||||||||| || Sbjct 23149 ACCACCACGTAAACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGA 23208 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | ||| ||||| || || || | ||| ||||||||| | || Sbjct 23209 AAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 23268 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || || || |||| || | ||||| |||| ||| | Sbjct 23269 AATGCCTTCCTTGTCTTGGATCTT-TGCTTTTACATTTTCAATAGTGTCACTTGGTTCAA 23327 Query 33701 CGTCAA 33706 | |||| Sbjct 23328 CCTCAA 23333 >seq1554 Length=107351 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || ||| || || || |||||||| || || Sbjct 8245 ACCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGA 8186 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | ||| ||||| ||||| || | ||| ||||||||| | || Sbjct 8185 CAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 8126 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | || || ||||| || || ||||| ||| ||| ||||| |||| ||||| Sbjct 8125 AATGCCCTCCTTGTCTTGGATCTTGGCTTTCA-CATTCTCAATTGTGTCACTTGGTTCCA 8067 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| ||||| || |||| ||||| |||||||||||||| Sbjct 8066 CCTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCAT 8018 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| ||||| |||||| || |||||||| || || Sbjct 10300 ACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGA 10241 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | ||| ||||| ||||| || | ||| ||||||||| | || Sbjct 10240 CAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 10181 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || || || |||| || | ||||| |||| ||| | Sbjct 10180 GATGCCTTCTTTGTCTTGGATCTT-TGCTTTTACATTTTCAATAGTGTCACTTGGTTCAA 10122 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || | || || || ||||| |||||| Sbjct 10121 CCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 10072 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| |||||| |||||| || |||||||| ||||| Sbjct 9322 ACCACCACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 9263 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | ||| ||||| || || || | ||||||||||||| | || Sbjct 9262 CAATGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGG 9203 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | | ||||| || | ||||| |||| ||| | Sbjct 9202 GATACCTTCTTTGTCTTGGATCTT-AGCCTTAACATTCTCAATTGTGTCACTTGGTTCTA 9144 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | || | ||||| ||||| |||| Sbjct 9143 CTTCTAGGGTGATAGTTTTGCCTG 9120 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| ||||| || ||||| ||||||||||| || Sbjct 13424 ACCACCACGTAGACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGA 13365 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | ||| ||||| || || |||||||| ||||||||| | || Sbjct 13364 AAGGGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGG 13305 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || || || | || |||| || | ||||| |||| ||| | Sbjct 13304 GATGCCTTCTTTATCTTGGATCTT-AGCTTTTACATTTTCAATAGTGTCACTTGGTTCAA 13246 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || || || | || || || ||||| |||||| Sbjct 13245 CCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATA 13196 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| |||||| |||||| || |||||||| || || Sbjct 10072 ACCACCACGGAGACGCAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGA 10013 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || || | ||| ||||| || || || | ||| ||||||||| | || Sbjct 10012 CAATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGGG 9953 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| || | |||||| |||| ||| | Sbjct 9952 GATGCCTTCTTTGTCTTGGATCTT-AGCCTTGACATTCTCAATGGTGTCACTTGGTTCTA 9894 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | |||| ||||| ||||| |||| Sbjct 9893 CCTCAAGGGTGATAGTTTTGCCTG 9870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | ||| |||||| |||||| || |||||||| || || Sbjct 10949 ACCACCACGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGA 10890 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | ||| ||||| || || || | ||| ||||||||| | || Sbjct 10889 CAATGTACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 10830 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| || | ||| || |||| ||| | Sbjct 10829 GATGCCTTCTTTGTCTTGGATCTT-AGCCTTGACATTCTCAATGGTATCACTTGGTTCTA 10771 Query 33701 CGTCAACCGTGATCGTTTTACCTG 33724 | |||| ||||| ||||| |||| Sbjct 10770 CCTCAAGGGTGATAGTTTTGCCTG 10747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328400755768320