Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1757 120 7e-22 seq1554 120 7e-22 seq75505 93.3 1e-13 seq17158 93.3 1e-13 >seq1757 Length=74305 Score = 120 bits (132), Expect = 7e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| ||||| ||||| | ||||| ||| ||||||| | || || ||| | Sbjct 32127 CAGGCAAAACTATCACCCTAGAAGTAGAACCAAGTGACACAATTGAGAATGTTAAGGCTA 32068 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| ||||| |||||||| || || || || | ||||||||||| ||||||| Sbjct 32067 AGATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAGCGTCTTATCTTCGCTGGAAAGC 32008 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | | |||||||| | || ||| |||| |||||| ||||||||||||| |||||||| | Sbjct 32007 AACTTGAAGATGGCCGAACATTGTCCGACTACAACATCCAGAAAGAGTCCACTCTTCATC 31948 Query 206375 TTGTTTTGAGACTTCG 206390 |||| ||| | ||||| Sbjct 31947 TTGTCTTGCGTCTTCG 31932 Score = 107 bits (118), Expect = 5e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || || || | || || ||| |||||| | ||| Sbjct 30418 CAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGTGACACTATTGAAAA 30359 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| |||||| ||||| |||||||| || || || ||| | |||||||| Sbjct 30358 TGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTT 30299 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||| | |||||||| | || ||| | || |||||| ||||||||||||| Sbjct 30298 TGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAACATCCAGAAAGAGTC 30239 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| || ||||| ||| | || || Sbjct 30238 TACTCTCCATCTTGTCTTGCGTCTCCG 30212 Score = 102 bits (112), Expect = 2e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| ||||| ||||| | || || ||| |||||| | || || ||| | Sbjct 29748 CAGGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTA 29689 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| ||||| |||||||| || || || ||| | ||||||||||| ||||||| Sbjct 29688 AGATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAGC 29629 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 || | |||||||| | || ||| | || |||||| ||||||||||||| ||||| || | Sbjct 29628 AGCTTGAAGATGGCCGCACATTGTCAGACTACAACATCCAGAAAGAGTCCACTCTCCATC 29569 Query 206375 TTGTTTTGAGACTTCG 206390 | || ||| | || || Sbjct 29568 TCGTCTTGCGTCTCCG 29553 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| ||||| |||||||| ||||||||||||| || ||||| | ||| || Sbjct 31932 CGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTT 31991 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| ||||||||||| || || ||| Sbjct 31992 CGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGA 32036 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || || || ||||| ||||||||||||| || ||||| | ||| || Sbjct 29553 CGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTG 29612 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| ||||||||||| ||||||||||| ||||| ||| Sbjct 29613 CGGCCATCTTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGA 29657 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| ||||| || ||||||||||||||||||| || ||||| | ||| || Sbjct 30212 CGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGACAATGTG 30271 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| || |||||||| ||||| ||| Sbjct 30272 CGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGA 30316 Score = 84.2 bits (92), Expect = 5e-11 Identities = 101/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 206247 AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGC 206306 |||||||| ||| ||||| || ||||| ||| || || ||| | ||||||||||| Sbjct 23298 AAAGCAAA-GATCCAAGACAAGGAAGGCATTCCCCCAGATCAGCAACGTCTTATCTTCGC 23240 Query 206307 CGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366 |||||||| | |||||||| | || | | ||||||||| |||| || || || || Sbjct 23239 TGGAAAGCAACTTGAAGATGGTCGCACCCTTTCAGATTACAACATCCAAAAGGAATCAAC 23180 Query 206367 TCTTCACCTTGTTTTG 206382 ||| || ||||| ||| Sbjct 23179 TCTCCATCTTGTCTTG 23164 >seq1554 Length=107351 Score = 120 bits (132), Expect = 7e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| ||||| ||||| | ||||| ||| ||||||| | || || ||| | Sbjct 9120 CAGGCAAAACTATCACCCTAGAAGTAGAACCAAGTGACACAATTGAGAATGTTAAGGCTA 9179 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| ||||| |||||||| || || || || | ||||||||||| ||||||| Sbjct 9180 AGATCCAAGACAAAGAAGGTATCCCCCCAGATCAGCAGCGTCTTATCTTCGCTGGAAAGC 9239 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | | |||||||| | || ||| |||| |||||| ||||||||||||| |||||||| | Sbjct 9240 AACTTGAAGATGGCCGTACATTGTCCGACTACAACATCCAGAAAGAGTCCACTCTTCATC 9299 Query 206375 TTGTTTTGAGACTTCG 206390 |||| ||| | ||||| Sbjct 9300 TTGTCTTGCGTCTTCG 9315 Score = 107 bits (118), Expect = 5e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || || || | || || ||| |||||| | ||| Sbjct 10087 CAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAACCAAGTGACACTATTGAAAA 10146 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| |||||| ||||| |||||||| || || || ||| | |||||||| Sbjct 10147 TGTAAAAGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTT 10206 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||| | |||||||| | || ||| | || |||||| ||||||||||||| Sbjct 10207 TGCTGGAAAGCAACTTGAAGATGGCCGCACATTGTCAGACTACAACATCCAGAAAGAGTC 10266 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| || ||||| ||| | || || Sbjct 10267 TACTCTCCATCTTGTCTTGCGTCTCCG 10293 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| ||||| |||||||| ||||||||||||| || ||||| | ||| || Sbjct 9315 CGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTA 9256 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| ||||||||||| || || ||| Sbjct 9255 CGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGA 9211 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| ||||| || ||||||||||||||||||| || ||||| | ||| || Sbjct 10293 CGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGACAATGTG 10234 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| || |||||||| ||||| ||| Sbjct 10233 CGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGA 10189 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| || || || ||| | ||||||||||| |||||| Sbjct 10806 AAGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGAAAG 10865 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | |||||||| | || ||| | || |||||| ||||||||||||| ||||| || Sbjct 10866 CAACTTGAAGATGGCCGTACATTGTCAGACTACAACATCCAGAAAGAGTCCACTCTCCAT 10925 Query 206374 CTTGTTTTGAGACTTCG 206390 || || ||| | || || Sbjct 10926 CTCGTCTTGCGTCTCCG 10942 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| ||||| ||||| | || || ||| |||||| | || || ||| | Sbjct 9870 CAGGCAAAACTATCACCCTTGAGGTAGAACCAAGTGACACCATTGAGAATGTCAAGGCTA 9929 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| ||||| |||||||| || || || ||| | || |||||||| ||||||| Sbjct 9930 AGATCCAAGACAAAGAAGGCATCCCCCCAGATCAGCAACGTCTCATCTTCGCTGGAAAGC 9989 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | | |||||||| | || ||| | || |||||| | ||||||||||| ||||| || | Sbjct 9990 AACTTGAAGATGGCCGCACATTGTCAGACTACAACATTCAGAAAGAGTCCACTCTCCATC 10049 Query 206375 TTGTTTTGAGACTTCG 206390 |||| ||| | || || Sbjct 10050 TTGTCTTGCGTCTCCG 10065 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || || || ||||| ||||||||||||| || ||||| | ||| || Sbjct 10942 CGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTA 10883 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| ||||||||||| ||||| ||| Sbjct 10882 CGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGA 10838 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| ||||| || ||||| ||||||||||| | || ||||| | ||| || Sbjct 10065 CGGAGACGCAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGACAATGTG 10006 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| || |||||||| |||||||| || ||||| ||| Sbjct 10005 CGGCCATCTTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGA 9961 >seq75505 Length=81545 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || || ||||| ||||| || ||||||||||||||| | || ||| | || |||||| Sbjct 77996 CAGAGGCTGATCTTTGCCGGCAAACAGTTGGAAGATGGACGAACCTTGTCTGACTACAAC 77937 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| || || ||||| || ||||| |||||||||| Sbjct 77936 ATCCAGAAGGAATCCACTCTCCATCTTGTACTGAGACTTCG 77896 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||||| ||||| || ||||| || || ||||||| || ||||||| ||| || Sbjct 77896 CGAAGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTT 77955 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 | ||||||||||| ||| || ||||| ||||| |||| Sbjct 77956 CGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCC 77992 >seq17158 Length=148548 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || || ||||| ||||| || ||||||||||||||| | || ||| | || |||||| Sbjct 118971 CAGAGGCTGATCTTTGCCGGCAAACAGTTGGAAGATGGACGAACCTTGTCTGACTACAAC 118912 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| || || ||||| || ||||| |||||||||| Sbjct 118911 ATCCAGAAGGAATCCACTCTCCATCTTGTACTGAGACTTCG 118871 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||||| ||||| || ||||| || || ||||||| || ||||||| ||| || Sbjct 118871 CGAAGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTT 118930 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCC 204848 | ||||||||||| ||| || ||||| ||||| |||| Sbjct 118931 CGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCC 118967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180674605188016