Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq33311 91.5 5e-15 seq24158 91.5 5e-15 seq73098 82.4 2e-12 seq9185 82.4 2e-12 seq1594 82.4 2e-12 seq55368 80.6 8e-12 seq15686 80.6 8e-12 seq23447 78.8 3e-11 seq17085 78.8 3e-11 >seq33311 Length=17544 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 17254 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 17311 >seq24158 Length=105501 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 104719 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 104662 >seq73098 Length=134833 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 107167 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 107224 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 110967 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 111024 >seq9185 Length=59579 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 56008 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 55951 >seq1594 Length=90258 Score = 82.4 bits (90), Expect = 2e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 4627 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 4684 >seq55368 Length=94488 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||||||| |||||| ||||||||| Sbjct 39058 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCTCTGGTTCAAAA 39117 Query 2829 CCGG 2832 |||| Sbjct 39118 CCGG 39121 >seq15686 Length=45110 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 28744 GCCGAAATAGCTCAGTTGGGAGAGCGCCAGACTGAAGATCTGAAGGTCCCTGGTTCAAAA 28803 Query 2829 CCGG 2832 |||| Sbjct 28804 CCGG 28807 >seq23447 Length=220889 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 18762 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 18712 >seq17085 Length=22844 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 4290 TAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAA 4240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15836477719920