Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1757 95.1 1e-14 seq1554 86.0 6e-12 >seq1757 Length=74305 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| || | ||| | ||| |||||||||||||||||| |||| | Sbjct 25178 CCACCACGCAGACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAC 25237 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || || || || || || || ||||| || ||||| || | ||| Sbjct 25238 AATGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGA 25297 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||| || ||| | | | | | || ||||| | ||| ||| Sbjct 25298 ATGCCTTCCTTGTCTTGGATTTTGGTCTTTACATTCTCAATTGTATCGCTTGGTTCTACC 25357 Query 35690 TCCACCGTGATCGTTTTACC 35709 || | ||||| |||||||| Sbjct 25358 TCAAGGGTGATAGTTTTACC 25377 >seq1554 Length=107351 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || || | ||| | ||| ||||||||||||||||| || | | Sbjct 13195 CCACCACGAAGACGTAATACAAGATGGAGGGTAGATTCCTTTTGAATGTTGTAGTCTGAC 13136 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || || ||||| || || || ||||| || ||||| || | || Sbjct 13135 AATGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGG 13076 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| |||||| |||| | | | | ||||| || | ||| ||| Sbjct 13075 ATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAACC 13016 Query 35690 TCCACCGTGATCGTTTTACC 35709 |||| || || |||||||| Sbjct 13015 TCCAGGGTAATGGTTTTACC 12996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450367059095680