Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1554 118 1e-21 seq1757 114 1e-20 >seq1554 Length=107351 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || || || || || ||||||||||| |||||||| || || |||| || Sbjct 13414 AGACGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGA 13355 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || || || || || || |||||||| |||||||| || || ||||||||| Sbjct 13354 CCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTCT 13295 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||| || || | ||||| | ||| || || || ||| Sbjct 13294 TTATCTTGGATCTTAGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACCTCAAGGGTA 13235 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || ||||| |||||||| Sbjct 13234 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 13197 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 || || | ||| |||| ||||| || || ||||||||||| || |||||||||| || | Sbjct 8244 CCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAC 8185 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || || || || || || ||||| || | ||| |||||||| || || Sbjct 8184 AA-TGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 8126 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || ||||| || || ||| || || | |||||| | |||||| Sbjct 8125 AATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCCAC 8066 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || ||||| || |||| ||||| || || || ||||||||| Sbjct 8065 CTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCATTTTG 8014 Score = 109 bits (120), Expect = 6e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || || || || || |||||||||||||||||||||||| Sbjct 18050 CCACCACGGAGACGCAAGACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGAC 17991 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || ||||| || || || || | ||| |||||||| || || Sbjct 17990 AATGTGCGGCCATCTTCAAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGA 17931 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| ||||| || || || | ||||||| | ||| || Sbjct 17930 ATGCCTTCCTTGTCTTGGATTTTGGTCTTTACATTCTCAATTGTGTCGCTTGGTTCTACC 17871 Query 134667 TCGAGAGTAATGGTTTTACC 134686 || || || ||||||||||| Sbjct 17870 TCAAGGGTTATGGTTTTACC 17851 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| || || || || || || || || || ||||||||||| | | Sbjct 10299 CCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGAC 10240 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || || || || || ||||| || | ||| |||||||| || || Sbjct 10239 AATG-TGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 10181 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| ||||| || ||| ||| || || | ||||| | ||| || Sbjct 10180 GATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAAC 10121 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || || || | || || ||||| |||||||| Sbjct 10120 CTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 10073 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || || || || || || || || ||||||||||||||||||||||| | ||| | || | Sbjct 13186 AGACGTAATACAAGATGGAGGGTAGATTCCTTTTGAATGTTGTAGTCTGACAATG-TGCG 13128 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || || || || || |||||||| |||||||| || || |||||||| Sbjct 13127 GCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTC 13068 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| || || ||| || || | ||||| | ||| || || || || Sbjct 13067 CTTGTCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAACCTCCAGGGT 13008 Query 134675 AATGGTTTTACC 134686 |||||||||||| Sbjct 13007 AATGGTTTTACC 12996 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| || | ||| |||||||| || || || ||||||||||| || ||||||||||| | Sbjct 16536 TTCCACCACGGAGACGCAACACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCTG 16477 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| ||| | || || || || || || || || |||||||| |||||||| || Sbjct 16476 ACAA-TGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGG 16418 Query 134604 GGTATGCCTTCTTTTTC 134620 || |||||||| || || Sbjct 16417 GGGATGCCTTCCTTGTC 16401 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| || || || || ||||| || || |||||||||||||| | | Sbjct 10071 CCACCACGGAGACGCAAGACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGAC 10012 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || || || || || || || || | ||| |||||||| || || Sbjct 10011 AATG-TGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGGG 9953 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 ||||||||||| ||||| || || Sbjct 9952 GATGCCTTCTTTGTCTTGGATCTT 9929 >seq1757 Length=74305 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| |||| ||||| || || ||||||||||| || ||||||||||| | | Sbjct 32998 CCACCACGGAGACGCAGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAC 33057 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || || || || || || ||||| || | ||| |||||||| || || Sbjct 33058 AA-TGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 33116 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || ||||| || || ||| || || | |||||| | |||||| Sbjct 33117 AATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTCTCGATTGTGTCACTTGGTTCCAC 33176 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || ||||| || |||| ||||| || || || ||||||||| Sbjct 33177 CTCAAGGGTGATAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCATTTTG 33228 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| |||||||| || || || ||||||||||| || |||||||||||| Sbjct 26444 TTCCACCACGGAGACGCAACACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGG 26503 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || || || || || ||||| || | ||| |||||||| || | Sbjct 26504 ACAATGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGG 26563 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || ||||| || || ||| || || | ||||| | ||||| Sbjct 26564 GAATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCCA 26623 Query 134665 CGTCGAGAGTAATGGTTTTACC 134686 | || || |||||||||||||| Sbjct 26624 CCTCAAGGGTAATGGTTTTACC 26645 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| || || || || || || || || || ||||||||||| | | Sbjct 30206 CCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGAC 30265 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || || || || || ||||| || | ||| |||||||| || || Sbjct 30266 AATG-TGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGG 30324 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| ||||| || ||| ||| || || | ||||| | ||| || Sbjct 30325 GATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAAC 30384 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || || || | || || ||||| |||||||| Sbjct 30385 CTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 30432 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || || || || || || ||||||||||||||||||||| | || | Sbjct 25187 AGACGCAAGACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGACAATGTACGG 25246 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || ||||| || || || |||||||| |||||||| || || |||||||| Sbjct 25247 CCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCC 25306 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| ||||| || || || | ||| ||| | ||| || || || || Sbjct 25307 TTGTCTTGGATTTTGGTCTTTACATTCTCAATTGTATCGCTTGGTTCTACCTCAAGGGTG 25366 Query 134676 ATGGTTTTACC 134686 || |||||||| Sbjct 25367 ATAGTTTTACC 25377 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 ||||| || || || || || ||||||||||| |||||||| || || |||| || Sbjct 23162 CGCAAGACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCA 23221 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || || || || || || || || | ||| |||||||| || || |||||||| || Sbjct 23222 TCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTG 23281 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| || ||| ||| || || | ||||| | ||| || || || |||||| Sbjct 23282 TCTTGGATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATG 23341 Query 134679 GT 134680 || Sbjct 23342 GT 23343 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| ||||| || || ||||| || || || ||||||||||| | | Sbjct 29547 CCACCACGGAGACGCAAGACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAC 29606 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || || ||||| || || || || || | ||| |||||||| || || Sbjct 29607 AA-TGTGCGGCCATCTTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 29665 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 || |||||||| ||||| || || Sbjct 29666 GATACCTTCTTTGTCTTGGATCTT 29689 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| |||| ||||| || || ||||||||||| || ||||||||||| | | Sbjct 30859 CCACCACGGAGACGCAGAACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGAC 30918 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || || || || || || || || || | ||| |||||||| || || Sbjct 30919 AA-TGTGCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGG 30977 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 |||||||| || ||||| || || Sbjct 30978 GATGCCTTCCTTGTCTTGGATCTT 31001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504920192033920