Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq7770 87.8 3e-12 seq6027 84.2 3e-11 >seq7770 Length=64466 Score = 87.8 bits (96), Expect = 3e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 161298 CAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGA 161357 |||||| ||||| |||| ||||| ||||| ||||| |||| || || ||||| | Sbjct 15736 CAGATACCGTCCGATTCTATCAGGCTTCCACTAGTGAAATGTACGGCAAAGTTCAAGAAA 15795 Query 161358 CACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGG 161403 ||||||||||||||| || || || ||||| || ||||||||||| Sbjct 15796 TACCACAGAAAGAAACTACGCCATTTTACCCTCGTTCTCCATATGG 15841 >seq6027 Length=56217 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 161298 CAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGA 161357 |||||| ||||| |||| ||||| ||||| ||||| |||| || || ||||| | Sbjct 10289 CAGATACCGTCCGATTCTATCAGGCTTCCACTAGTGAAATGTACGGCAAAGTTCAAGAAA 10230 Query 161358 CACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGG 161403 ||| ||||||||||| || || || ||||| || ||||||||||| Sbjct 10229 TACCGCAGAAAGAAACTACGCCATTTTACCCTCGTTCTCCATATGG 10184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729238940612480