Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq72101 89.7 6e-13 seq70036 89.7 6e-13 seq39745 86.0 8e-12 seq8201 86.0 8e-12 >seq72101 Length=85746 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 130055 TCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAA 130114 ||||| ||||| | ||||||||||| ||||| ||||||||||||||| || ||| | Sbjct 42123 TCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTCAACCAGAAGATAGCAGCA 42182 Query 130115 AATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 || || || ||||| ||||| ||||| ||| ||||| |||| | || ||| |||| Sbjct 42183 AAGGAACCTGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCAACCACTCGTTCACCAAA 42241 >seq70036 Length=130556 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 130055 TCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAA 130114 ||||| ||||| | ||||||||||| ||||| ||||||||||||||| || ||| | Sbjct 53185 TCATTGGAGAAAGTTAAACCTGGCATGACACCCCTCTTCTTCAACCAGAAGATAGCAGCA 53126 Query 130115 AATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 || || || ||||| ||||| ||||| ||| ||||| |||| | || ||| |||| Sbjct 53125 AAGGAACCCGAGAAAAAGATGCCCTCGACAGCGGCGAAAGCAACCACTCGTTCACCAAA 53067 >seq39745 Length=16847 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||||| |||| | ||||||||||||| ||||||||| || ||| Sbjct 13267 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 13208 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 || || ||||||||||| | || || |||||||| Sbjct 13207 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACG 13173 >seq8201 Length=93372 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||||| |||| | ||||||||||||| ||||||||| || ||| Sbjct 59181 TAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGAG 59240 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 || || ||||||||||| | || || |||||||| Sbjct 59241 GCAGTAGGCATGGGTGCTAATAGTAGACTGTTACG 59275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617850036613760