Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq39745 86.0 7e-12 seq8201 86.0 7e-12 >seq39745 Length=16847 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 105419 CTTCAATTTGATATGTGGGAAGGTGAGAC-CAAGCTTCACTACG--ACTGGGAAGCTCTC 105475 || |||| ||||||||||| || |||| | | || || | |||||| || || Sbjct 13089 CTGCAATATGATATGTGGG---GTAAGACTCCAACTGACCTTTGGGACTGGGCTGCCCTT 13145 Query 105476 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACA 105535 |||| |||||| | | || | ||||||||||| || | || || ||||| || Sbjct 13146 AAGGCCGAGATCAAGAAACATGGCGTACGTAACAGTCTACTATTAGCACCCATGCCTACT 13205 Query 105536 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 105595 ||||| ||||| |||||| ||||||| |||||| | ||||| | ||||| | |||||| Sbjct 13206 GCCTCAACCGCCCAAATCCTGGGTAACAATGAAGCCATTGAAGCATACACCAGCAACATC 13265 Query 105596 TA 105597 || Sbjct 13266 TA 13267 >seq8201 Length=93372 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 ||||||| || || |||| |||||| | | || | ||||||||||| || | Sbjct 59317 GACTGGGCTGCCCTTAAGGCCGAGATCAAGAAACATGGCGTACGTAACAGTCTACTATTA 59258 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || || ||||| || ||||| ||||| |||||| ||||||| |||||| | ||||| | Sbjct 59257 GCACCCATGCCTACTGCCTCAACCGCCCAAATCCTGGGTAACAATGAAGCCATTGAAGCA 59198 Query 105581 TACACGACGAACATCTA 105597 ||||| | |||||||| Sbjct 59197 TACACCAGCAACATCTA 59181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582708918631040