Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq39745 95.1 1e-14 seq8201 95.1 1e-14 >seq39745 Length=16847 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 |||||||||| | ||||| | || | || || ||||| |||| ||| |||||||| || Sbjct 13268 GTAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGA 13209 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| || ||||||||||| | |||||| || || | ||||| ||||||||||| | Sbjct 13208 GGCAGTAGGCATGGGTGCTAATAGTAGACTGTTACGTACGCCATGTTTCTTGATCTCGGC 13149 Query 78654 CTTTAGGCCGTCCCA 78668 ||| ||| | |||| Sbjct 13148 CTTAAGGGCAGCCCA 13134 >seq8201 Length=93372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 |||||||||| | ||||| | || | || || ||||| |||| ||| |||||||| || Sbjct 59180 GTAGATGTTGCTGGTGTATGCTTCAATGGCTTCATTGTTACCCAGGATTTGGGCGGTTGA 59239 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| || ||||||||||| | |||||| || || | ||||| ||||||||||| | Sbjct 59240 GGCAGTAGGCATGGGTGCTAATAGTAGACTGTTACGTACGCCATGTTTCTTGATCTCGGC 59299 Query 78654 CTTTAGGCCGTCCCA 78668 ||| ||| | |||| Sbjct 59300 CTTAAGGGCAGCCCA 59314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548005785834240