Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_028661.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq54356 93.3 1e-14 >seq54356 Length=14911 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 39026 CACTCCCCTTCTGTGAAGTCTGTCGGTATCACCGGTCAGTTGACTGGTAGCCGTGCTGAC 39085 ||||| || || || || |||||||| || || || ||| |||| || |||||||| Sbjct 2612 CACTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGAT 2553 Query 39086 ATCCTCATTGCGGATGACGTTGAGGTCCCGAACAACTCTGGCACACAGGCCGCTCGTGAT 39145 | || || || |||||||||||||||| ||||||| | | || ||| || || Sbjct 2552 CTGCTGATCGCTGATGACGTTGAGGTCCTGAACAACGCCGCAACCCAGCAAATGCGGGAC 2493 Query 39146 CACCTTGGCGAACTCGTTAAGGAATTCGATGCGATCCTGAAGCCGGGCG 39194 | || ||||| | || |||||||| || || ||||| ||||||| || Sbjct 2492 AAGCTCGGCGAGGTGGTCAAGGAATTTGACGCCATCCTCAAGCCGGACG 2444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131436946346272