Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_029031.1 Length=45218 Score E Sequences producing significant alignments: (Bits) Value seq54356 102 2e-17 >seq54356 Length=14911 Score = 102 bits (112), Expect = 2e-17 Identities = 220/326 (67%), Gaps = 5/326 (2%) Strand=Plus/Minus Query 25413 GCTTTCCGAGGAGTAGGTAAATCATGGATCACAGCAGCATTCGTCCTGTGGGTCCTCTTC 25472 || ||||| || || ||||||||| ||||| | || | || | ||| || || Sbjct 2846 GCATTCCGGGGCGTGGGTAAATCACATATCACCTCGGCCTATGTTGTCTGGCGGCTGCTC 2787 Query 25473 AACGACCCGGACAAGAAGATCATGGTGATCTCGGCCTCGAAGGAACGCGCCGACAACTTC 25532 ||||| || |||||||||||| |||||||||| ||||| ||||| || | ||| Sbjct 2786 TGTGACCCTGAGCTGAAGATCATGGTTGTCTCGGCCTCCAAGGACCGCGCTGATCAATTC 2727 Query 25533 TCCATTTTCTGTCAAAAACTAATCCTAGACATCAGCTGGC-TGAATCATCTCGGCCCCAA 25591 |||| || || || ||| || | ||||| | | ||||| ||||| Sbjct 2726 TCCACATTTACCCAGCGTCTGATCGCTGAGCTGC-CTGGCCTCGAGCATCTAAAACCCAA 2668 Query 25592 GTCAGACGATCAGCGGTGGTCGCGGATCTCCTTCGACGTAGGGCCCGCCAAGCCCCACCA 25651 | ||| ||| | || |||| | || || || |||||||||||| | || Sbjct 2667 GGGGGAC---CAGAGAAACTCCAAGATCGCATTTGATGTTGGGCCCGCCAAGGCGTCTCA 2611 Query 25652 GGCACCCTCTGTCAAGTCTGTGGGCATCACAGGACAGATGACTGGTTCCCGTGCCCATTT 25711 | ||||| ||||| ||||| ||||| ||||| |||||||| || || ||||| || | Sbjct 2610 CTCGCCCTCAGTCAAATCTGTCGGCATTACAGGCCAGATGACGGGCTCTCGTGCTGATCT 2551 Query 25712 GATGATCTTCGATGACGTTGAAGTCC 25737 | ||||| ||||||||||| |||| Sbjct 2550 GCTGATCGCTGATGACGTTGAGGTCC 2525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144446042079360