Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq37879 98.7 8e-16 seq4605 95.1 1e-14 >seq37879 Length=18190 Score = 98.7 bits (108), Expect = 8e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 118464 TTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTC 118523 |||||||||||||||||| || | |||||||||||||| ||||||||||||| || || Sbjct 3033 TTTCAGTGGCTCAATGTGGTTGAGGTAGACATGAGCATCGCCAATTGTATGTACAAAATC 2974 Query 118524 ACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTAC 118583 ||||| | || ||||| | | || |||||||| || | | | ||| || || | Sbjct 2973 TCCAGGCTTCAGACCTGTGATTTCTGCTATCATGTAGGTTAGGAGAGAGTAACTTGCGAT 2914 Query 118584 ATTAAAAGGAACACCCAGACCC 118605 || || || ||||| |||||| Sbjct 2913 GTTGAATGGTACACCAAGACCC 2892 >seq4605 Length=47375 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 118464 TTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTC 118523 ||||||||| || |||||||| | |||||||||||||| ||||||||||||| ||| || Sbjct 44478 TTTCAGTGGTTCTATGTGATTGAGGTAGACATGAGCATCGCCAATTGTATGTACGAAATC 44537 Query 118524 ACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTAC 118583 ||||| | || ||||| | | || |||||||| || | | | ||| || || | Sbjct 44538 TCCAGGCTTCAGACCTGTGATTTCTGCTATCATGTAGGTTAGGAGAGAGTAACTTGCGAT 44597 Query 118584 ATTAAAAGGAACACCCAGACCC 118605 || || || || || |||||| Sbjct 44598 GTTGAATGGTACGCCAAGACCC 44619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414094426500544