Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1757 152 1e-31 seq1554 145 2e-29 seq75505 96.9 8e-15 seq17158 96.9 8e-15 seq73599 93.3 1e-13 seq31160 93.3 1e-13 >seq1757 Length=74305 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||| || ||||| || || ||||||||||| ||||| | |||||| | |||||||| Sbjct 23167 GACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTC 23226 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || ||||||||||| ||||| || || || |||| ||||||||||| || Sbjct 23227 AAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 23286 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCT 211083 ||||||| ||| || ||||| || |||||| ||||||||| || || || |||| Sbjct 23287 GATCTTTGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCT 23345 Score = 123 bits (136), Expect = 6e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || || |||||||||||||| |||||||| || || | | || | |||||||| Sbjct 29564 GACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTC 29623 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||| || ||||||||||| ||||| || || || || | ||||| ||||| || Sbjct 29624 AAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATACCTTCTTTGTCTTG 29683 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||| || || || || ||||||||| ||| ||||| || ||||| || || Sbjct 29684 GATCTTAGCCTTGACATTCTCAATGGTGTCACTTGGTTCTACCTCAAGGGTGATAGTTTT 29743 Query 211085 TCC 211087 || Sbjct 29744 GCC 29746 Score = 118 bits (130), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | |||||| ||||||||||||||||| |||||||| || || | | || Sbjct 31931 ACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGT 31990 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || ||||||||||| || || || || || || | || Sbjct 31991 TCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGGATACC 32050 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| |||||||| || || || || || |||||| ||| || || || Sbjct 32051 TTCTTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTCACTTGGTTCTACTTCTAG 32110 Query 211073 AGTGATCGTCTTTCC 211087 ||||| || || || Sbjct 32111 GGTGATAGTTTTGCC 32125 Score = 109 bits (120), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || ||||| || || |||||||| || || | | || | |||||| Sbjct 30874 AGAACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCT 30933 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| ||||| || || || || | ||||||||||| Sbjct 30934 TCAAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCCTTGTCT 30993 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| ||| ||||| || ||||| || Sbjct 30994 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTTGGTTCTACCTCAAGGGTGATAGTT 31053 Query 211083 TTTCC 211087 || || Sbjct 31054 TTGCC 31058 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||| || ||||| ||||| ||||| ||||| || || | | || | |||||||| Sbjct 25195 GACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGACAATGTACGGCCATCTTC 25254 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || || || || |||||||| | ||||| || || || |||| ||||||||||| || Sbjct 25255 AAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 25314 Query 211025 GATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCG 211080 ||| ||| || || || || || || || || ||| ||| ||||| || ||||| | Sbjct 25315 GAT-TTTGGTCTTTACATTCTCAATTGTATC---GCTTGGTTCTACCTCAAGGGTGATAG 25370 Query 211081 TCTTTCC 211087 | || || Sbjct 25371 TTTTACC 25377 >seq1554 Length=107351 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||| || ||||| || || ||||||||||| ||||| | |||||| | |||||||| Sbjct 13406 GACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTC 13347 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || |||||||| | ||||| || || || || | ||||| || || || Sbjct 13346 AAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTCTTTATCTTG 13287 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||| ||| || ||||| || |||||| ||||||||| || || || ||||| Sbjct 13286 GATCTTAGCTTTTACATTTTCAATAGTGTCACTTGGTTCAACCTCAAGGGTAATGGTCTT 13227 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || | ||||| Sbjct 13226 GCCAGTGAGGGTCTTGACGAAGATTTGCAT 13197 Score = 118 bits (130), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | |||||| ||||||||||||||||| |||||||| || || | | || Sbjct 9316 ACGAAGACGCAAGACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGT 9257 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || ||||||||||| || || || || || || | || Sbjct 9256 ACGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGGATACC 9197 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| |||||||| || || || || || |||||| ||| || || || Sbjct 9196 TTCTTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTCACTTGGTTCTACTTCTAG 9137 Query 211073 AGTGATCGTCTTTCC 211087 ||||| || || || Sbjct 9136 GGTGATAGTTTTGCC 9122 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||| || |||||||||||||| || ||||| || || | | || | |||||||| Sbjct 10054 GACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGACAATGTGCGGCCATCTTC 9995 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || |||||||| || ||||| || || || || | ||||| ||||| || Sbjct 9994 AAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCTTG 9935 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||| || || || || ||||||||| ||| ||||| || ||||| || || Sbjct 9934 GATCTTAGCCTTGACATTCTCAATGGTGTCACTTGGTTCTACCTCAAGGGTGATAGTTTT 9875 Query 211085 TCC 211087 || Sbjct 9874 GCC 9872 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || || |||||||||||||| |||||||| || || | | || | |||||||| Sbjct 10931 GACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGGCCATCTTC 10872 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || ||||||||||| ||||| || || || || | ||||| ||||| || Sbjct 10871 AAGTTGCTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCTTG 10812 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 |||||| || || || || ||||| ||| ||| ||||| || ||||| || || Sbjct 10811 GATCTTAGCCTTGACATTCTCAATGGTATCACTTGGTTCTACCTCAAGGGTGATAGTTTT 10752 Query 211085 TCC 211087 || Sbjct 10751 GCC 10749 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || || || || || ||||| ||||| || || | | || Sbjct 13190 ACGAAGACGTAATACAAGATGGAGGGTAGATTCCTTTTGAATGTTGTAGTCTGACAATGT 13131 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || |||||||| | ||||| || || || || | || Sbjct 13130 GCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCC 13071 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| |||||||| |||||| || || ||||||||| ||||||||| || Sbjct 13070 TTCCTTGTCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAACCTCCAG 13011 Query 211073 AGTGATCGTCTTTCC 211087 || || || || || Sbjct 13010 GGTAATGGTTTTACC 12996 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||| || || || || || ||||| ||||| || || | | || | |||||||| Sbjct 18033 GACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGACAATGTGCGGCCATCTTC 17974 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || || || || ||||||||||| ||||| || || || |||| ||||||||||| || Sbjct 17973 AAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 17914 Query 211025 GATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCG 211080 ||| ||| || || || || || || ||||| ||| ||| ||||| || || || | Sbjct 17913 GAT-TTTGGTCTTTACATTCTCAATTGTGTC---GCTTGGTTCTACCTCAAGGGTTATGG 17858 Query 211081 TCTTTCC 211087 | || || Sbjct 17857 TTTTACC 17851 >seq75505 Length=81545 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || ||||| || |||||||| || || |||||||| || || | | ||| Sbjct 77895 ACGAAGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGT 77954 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 | ||||||||||| ||| ||||| || ||||| || | || ||||| ||||||| Sbjct 77955 TCGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAA 78010 >seq17158 Length=148548 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || ||||| || |||||||| || || |||||||| || || | | ||| Sbjct 118870 ACGAAGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGT 118929 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 | ||||||||||| ||| ||||| || ||||| || | || ||||| ||||||| Sbjct 118930 TCGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAA 118985 >seq73599 Length=153527 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||| ||||| |||||||| || || ||||| ||||||||||| || |||||| Sbjct 9453 CCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCG 9512 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| |||||||| ||||| ||||| | |||||| Sbjct 9513 AGGGTGATGGTCTTCCCCGTGAGGGTCTTCACAAATATCTGCAT 9556 >seq31160 Length=26930 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||| ||||| |||||||| || || ||||| |||||||||||| || ||||| Sbjct 4614 CCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAGGGCTCCACCTCC 4555 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| |||||||| ||||| ||||| | |||||| Sbjct 4554 AGGGTGATGGTCTTCCCCGTGAGGGTCTTCACAAATATCTGCAT 4511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158027790637040