Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq37879 95.1 1e-14 seq4605 91.5 1e-13 >seq37879 Length=18190 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 |||| || || | ||||| |||||||| |||||||| || | || || ||||| |||| Sbjct 3031 TCAGTGGCTCAATGTGGTTGAGGTAGACATGAGCATCGCCAATTGTATGTACAAAATCTC 2972 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 | || | || || |||| | || |||||||| || ||||||||||| || ||||||| Sbjct 2971 CAGGCTTCAGACCTGTGATTTCTGCTATCATGTAGGTTAGGAGAGAGTAACTTGCGATGT 2912 Query 29766 TAAAGGGCACCCCGAGCCCC 29785 | || || || || || ||| Sbjct 2911 TGAATGGTACACCAAGACCC 2892 >seq4605 Length=47375 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 |||| ||||| | ||| | |||||||| |||||||| || | || || || || |||| Sbjct 44480 TCAGTGGTTCTATGTGATTGAGGTAGACATGAGCATCGCCAATTGTATGTACGAAATCTC 44539 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 | || | || || |||| | || |||||||| || ||||||||||| || ||||||| Sbjct 44540 CAGGCTTCAGACCTGTGATTTCTGCTATCATGTAGGTTAGGAGAGAGTAACTTGCGATGT 44599 Query 29766 TAAAGGGCACCCCGAGCCCC 29785 | || || || || || ||| Sbjct 44600 TGAATGGTACGCCAAGACCC 44619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405788496170656