Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq39745 116 5e-21 seq72101 104 3e-17 seq70036 100 4e-16 >seq39745 Length=16847 Score = 116 bits (128), Expect = 5e-21 Identities = 175/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 |||| || | ||||||||| ||||||||| | |||||| || ||||||||| Sbjct 4172 TTTCTTACTTTGTATATAGCTCTTCAAATTCCTTTCCCCAGCAGTCGGGTAATCCAGGGG 4113 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||||| ||||||||||| |||| |||||||| | | || | || ||| || | || Sbjct 4112 ATTCATGTGGGCACATCAGGCACCAATCACCATCCTGTTCTACCCTTTCCATGAATAAAT 4053 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 | || ||||| | ||| || ||||| || | || | ||||| ||| || |||| Sbjct 4052 CTGGAATCCACATAGCGTAGAAAAGATCGCGAGCCCTGTTCTCTTCTGATCCGGTGTTCT 3993 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 ||||| ||| | ||||| ||||| | |||||| ||||| ||||| || || | | Sbjct 3992 TTTTACAATCCAAGAACTCGTAGATATCTGCATGCCAAGGTTCAAGATAGATGGCAAAAG 3933 Query 78142 CTCCAGGTC 78150 | || |||| Sbjct 3932 CACCGGGTC 3924 >seq72101 Length=85746 Score = 104 bits (114), Expect = 3e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 48527 ATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA 48586 |||||| || || || |||||||| |||||||| || || || |||||| |||||| | Sbjct 44438 ATTCTCGTTAACGATGCCATCACTGGCAGCAAAGAAGGCCAACACATGTGAAATAAAGTG 44497 Query 48587 TTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 48646 || |||| | || || | ||| | | || || || || | ||| ||||| || Sbjct 44498 CTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACTTCCTC 44557 Query 48647 AGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGAT 48706 ||||||| ||||| |||||||| || || ||||| ||| || || | ||||||| Sbjct 44558 GACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAATTGGAT 44617 Query 48707 TGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATAGGTTC 48751 |||||| || || |||| | ||||| | | ||| | ||||| Sbjct 44618 TGGGAAGATGACGAATCGACGGGGATTCTCTCTAAGTAGGGGTTC 44662 >seq70036 Length=130556 Score = 100 bits (110), Expect = 4e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 48527 ATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA 48586 |||||| || || || |||||||| |||||||| || || || ||||| |||||| | Sbjct 51607 ATTCTCGTTGACGATGCCATCACTGGCAGCAAAGAACGCCAACACATGCGAAATAAAGTG 51548 Query 48587 TTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 48646 || |||| | || || | ||| | | || || || || | ||| || || || Sbjct 51547 CTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACCTCCTC 51488 Query 48647 AGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGAT 48706 ||||||| ||||| |||||||| || || ||||| ||| || || | ||||||| Sbjct 51487 GACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAATTGGAT 51428 Query 48707 TGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATAGGTTC 48751 |||||| || ||||||| | ||||| | | ||| | ||||| Sbjct 51427 TGGGAAGATGACAAATCGACGGGGATTCTCTCTAAGTAGGGGTTC 51383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694011504381440