Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq72101 118 2e-21 seq70036 113 6e-20 >seq72101 Length=85746 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 47016 ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATA 47075 |||||| || || || |||||||| |||||||| || ||||| |||||| |||||| | Sbjct 44438 ATTCTCGTTAACGATGCCATCACTGGCAGCAAAGAAGGCCAACACATGTGAAATAAAGTG 44497 Query 47076 TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135 || || || | | || || | ||| | | || || || || | ||| ||||| || Sbjct 44498 CTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACTTCCTC 44557 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195 |||||||||||||||||||||| || || ||||| ||| || || | ||||||| Sbjct 44558 GACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAATTGGAT 44617 Query 47196 CGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTC 47240 || || || || |||| | ||||| | | ||||| ||||| Sbjct 44618 TGGGAAGATGACGAATCGACGGGGATTCTCTCTAAGTAGGGGTTC 44662 >seq70036 Length=130556 Score = 113 bits (124), Expect = 6e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 47016 ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATA 47075 |||||| || || || |||||||| |||||||| || ||||| ||||| |||||| | Sbjct 51607 ATTCTCGTTGACGATGCCATCACTGGCAGCAAAGAACGCCAACACATGCGAAATAAAGTG 51548 Query 47076 TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135 || || || | | || || | ||| | | || || || || | ||| || || || Sbjct 51547 CTTCTCGTCCTTGTTGAGCTTGTCCCAATGACCCATGTCCTTGGACAGATCCACCTCCTC 51488 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195 |||||||||||||||||||||| || || ||||| ||| || || | ||||||| Sbjct 51487 GACTGTCCAGAATGACGCCTCTGCCTTCTTGTACATGAGCCAGATGTCTTGGAATTGGAT 51428 Query 47196 CGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTC 47240 || || || ||||||| | ||||| | | ||||| ||||| Sbjct 51427 TGGGAAGATGACAAATCGACGGGGATTCTCTCTAAGTAGGGGTTC 51383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712259821470720