Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1757 127 5e-24 seq1554 127 5e-24 seq75505 89.7 1e-12 seq17158 89.7 1e-12 >seq1757 Length=74305 Score = 127 bits (140), Expect = 5e-24 Identities = 159/215 (74%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| |||||||||||||| ||||||||||| || | || || | |||||||| Sbjct 30223 GACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTC 30282 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || || |||||||| | ||||| || | | ||| ||||| || ||| Sbjct 30283 AAGTTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCT 30340 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || ||| ||| ||| | || | |||| ||| || || ||||| ||||| Sbjct 30341 TGGATCTTTGCTTTTACATTTTCAATAGTGTC---ACTTGGTTCAACCTCAAGGGTAATG 30397 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||| ||||||| ||||| Sbjct 30398 GTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 30432 Score = 123 bits (136), Expect = 6e-23 Identities = 142/188 (76%), Gaps = 10/188 (5%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||||||||| |||||||| ||||||||||| |||| || |||| |||||||| Sbjct 31943 GACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTTCGGCCATCTTC 32002 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||||||||| | |||||| || | | ||| ||||| || ||| Sbjct 32003 AAGTTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCT 32060 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | |||| ||| |||||||| || || ||| Sbjct 32061 TGGATCTTAGCCTTAACATTCTCAATTGTGTC---ACTTGGTTCTACTTCTAGGGTGATA 32117 Query 152070 GTTTTGCC 152077 |||||||| Sbjct 32118 GTTTTGCC 32125 Score = 109 bits (120), Expect = 1e-18 Identities = 139/188 (74%), Gaps = 10/188 (5%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| ||||| ||||| |||||||| ||||||||||| || | || || | |||||||| Sbjct 29564 GACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTC 29623 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||||||||| | ||||| || | | ||| ||||| || ||| Sbjct 29624 AAGCTGCTTT--CCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATACCTTCTTTGTCT 29681 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || |||||| |||| | | |||| ||| ||||| ||||| || ||| Sbjct 29682 TGGATCTTAGCCTTGACATTCTCAATGGTGTC---ACTTGGTTCTACCTCAAGGGTGATA 29738 Query 152070 GTTTTGCC 152077 |||||||| Sbjct 29739 GTTTTGCC 29746 Score = 104 bits (114), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 10/220 (5%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || || || || ||||||||||| || | || || | |||||| Sbjct 33013 AGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCT 33072 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || |||||||| | ||||| || | | || || ||||| | Sbjct 33073 TCAAGTTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGT 33130 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| || || ||| ||| |||| | |||| ||| || || ||||| || | Sbjct 33131 CTTGGATCTTGGCTTTCACATTCTCGATTGTGTC---ACTTGGTTCCACCTCAAGGGTGA 33187 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||||| || || || || || |||| ||||||||| Sbjct 33188 TAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCATTTT 33227 Score = 100 bits (110), Expect = 7e-16 Identities = 138/190 (73%), Gaps = 10/190 (5%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || || || || ||||||||||| || | || || | |||||| Sbjct 30874 AGAACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCT 30933 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || ||||||||||| | ||||| || | | ||| |||||||| | Sbjct 30934 TCAAGTTGCTTT--CCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCCTTGT 30991 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| || || |||||| |||| | | |||| ||| ||||| ||||| || | Sbjct 30992 CTTGGATCTTAGCCTTGACATTCTCAATGGTGTC---ACTTGGTTCTACCTCAAGGGTGA 31048 Query 152068 TAGTTTTGCC 152077 |||||||||| Sbjct 31049 TAGTTTTGCC 31058 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| ||||||||||| ||||| |||||||| |||| || || | |||||||| Sbjct 25195 GACAAGATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCGGACAATGTACGGCCATCTTC 25254 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || ||| || |||||||| | | ||||| || | | || |||||||| ||||| Sbjct 25255 AAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 25314 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||| || ||| |||| | | || ||||| ||||| || |||||||| Sbjct 25315 GATTTTGGTCTTTACATTCTCAATTGTATCGCTTGGTTCTACCTCAAGGGTGATAGTTTT 25374 Query 152075 GCC 152077 || Sbjct 25375 ACC 25377 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| ||||| || || ||||||||||||||||| | | || | |||||||| Sbjct 23167 GACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTC 23226 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||||||||| | ||||| || | | || |||||||| ||| Sbjct 23227 AAGTTGCTTT--CCAGCGAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCT 23284 Query 152013 TGAATTTTTTGTTTGACA 152030 || || ||| ||| ||| Sbjct 23285 TGGATCTTTGCTTTTACA 23302 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/187 (72%), Gaps = 10/187 (5%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||| || || || || ||||||||||| |||| || || | |||||||| Sbjct 26464 ACAAGATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGGCCATCTTCA 26523 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 || ||||| || || |||||||| | ||||| || | | || || ||||| |||| Sbjct 26524 AGTTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTT 26581 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAG 152070 | || || ||| ||| |||| | | |||| ||| || || ||||| ||||| | Sbjct 26582 GGATCTTGGCTTTCACATTCTCAATGGTGTC---ACTTGGTTCCACCTCAAGGGTAATGG 26638 Query 152071 TTTTGCC 152077 |||| || Sbjct 26639 TTTTACC 26645 >seq1554 Length=107351 Score = 127 bits (140), Expect = 5e-24 Identities = 159/215 (74%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| |||||||||||||| ||||||||||| || | || || | |||||||| Sbjct 10282 GACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCTGACAATGTGCGGCCATCTTC 10223 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || || |||||||| | ||||| || | | ||| ||||| || ||| Sbjct 10222 AAGTTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCT 10165 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || ||| ||| ||| | || | |||| ||| || || ||||| ||||| Sbjct 10164 TGGATCTTTGCTTTTACATTTTCAATAGTGTC---ACTTGGTTCAACCTCAAGGGTAATG 10108 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||| ||||||| ||||| Sbjct 10107 GTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 10073 Score = 118 bits (130), Expect = 2e-21 Identities = 141/188 (75%), Gaps = 10/188 (5%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||||||||| |||||||| ||||||||||| |||| || || | |||||||| Sbjct 9304 GACAAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAATGTACGGCCATCTTC 9245 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||||||||| | |||||| || | | ||| ||||| || ||| Sbjct 9244 AAGTTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCT 9187 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | |||| ||| |||||||| || || ||| Sbjct 9186 TGGATCTTAGCCTTAACATTCTCAATTGTGTC---ACTTGGTTCTACTTCTAGGGTGATA 9130 Query 152070 GTTTTGCC 152077 |||||||| Sbjct 9129 GTTTTGCC 9122 Score = 109 bits (120), Expect = 1e-18 Identities = 155/215 (72%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| ||||| || || ||||||||||||||||| | | || | |||||||| Sbjct 13406 GACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCTGAAAGGGTGCGACCATCTTC 13347 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || |||||||| | | ||||| || | | ||| ||||| || ||| Sbjct 13346 AAGTTGCTTT--CCAGCGAAGATCAAACGTTGCTGATCTGGGGGGATGCCTTCTTTATCT 13289 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||| ||| | || | |||| ||| || || ||||| ||||| Sbjct 13288 TGGATCTTAGCTTTTACATTTTCAATAGTGTC---ACTTGGTTCAACCTCAAGGGTAATG 13232 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||| ||||||| ||||| Sbjct 13231 GTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 13197 Score = 105 bits (116), Expect = 2e-17 Identities = 138/188 (73%), Gaps = 10/188 (5%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| ||||| |||||||| || |||||||| || | || || | |||||||| Sbjct 10054 GACAAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCTGACAATGTGCGGCCATCTTC 9995 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || |||||||| || | ||||| || | | ||| ||||| || ||| Sbjct 9994 AAGTTGCTTT--CCAGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCT 9937 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATA 152069 || || || |||||| |||| | | |||| ||| ||||| ||||| || ||| Sbjct 9936 TGGATCTTAGCCTTGACATTCTCAATGGTGTC---ACTTGGTTCTACCTCAAGGGTGATA 9880 Query 152070 GTTTTGCC 152077 |||||||| Sbjct 9879 GTTTTGCC 9872 Score = 105 bits (116), Expect = 2e-17 Identities = 138/188 (73%), Gaps = 10/188 (5%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| ||||| ||||| |||||||| ||||||||||| || | || || | |||||||| Sbjct 10931 GACGAGATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGGCCATCTTC 10872 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || ||||||||||| | ||||| || | | ||| ||||| || ||| Sbjct 10871 AAGTTGCTTT--CCAGCGAAGATAAGACGTTGCTGATCTGGGGGGATGCCTTCTTTGTCT 10814 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || |||||| |||| | | | || ||| ||||| ||||| || ||| Sbjct 10813 TGGATCTTAGCCTTGACATTCTCAATGGTATC---ACTTGGTTCTACCTCAAGGGTGATA 10757 Query 152070 GTTTTGCC 152077 |||||||| Sbjct 10756 GTTTTGCC 10749 Score = 104 bits (114), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || || || || ||||||||||| || | || || | |||||| Sbjct 8229 AGGACGAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGACAATGTGCGGCCATCT 8170 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || |||||||| | ||||| || | | || || ||||| | Sbjct 8169 TCAAGTTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTTGT 8112 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| || || ||| ||| |||| | |||| ||| || || ||||| || | Sbjct 8111 CTTGGATCTTGGCTTTCACATTCTCAATTGTGTC---ACTTGGTTCCACCTCAAGGGTGA 8055 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||||| || || || || || |||| ||||||||| Sbjct 8054 TAGTTTTGCCAGTTAGTGTTTTGACAAAGATCTGCATTTT 8015 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| || || || || ||||| |||||||| |||| || || | |||||||| Sbjct 18033 GACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGACAATGTGCGGCCATCTTC 17974 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || ||| || ||||||||||| | ||||| || | | || |||||||| ||||| Sbjct 17973 AAGTTGTTTTCCAGCGAAGATAAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 17914 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||| || ||| |||| | |||| ||||| ||||| || || ||||| Sbjct 17913 GATTTTGGTCTTTACATTCTCAATTGTGTCGCTTGGTTCTACCTCAAGGGTTATGGTTTT 17854 Query 152075 GCC 152077 || Sbjct 17853 ACC 17851 >seq75505 Length=81545 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || |||||||| ||||| || || || ||||||||||| || | || |||| Sbjct 77899 AGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTTCGT 77958 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 |||||||| | ||| ||||| ||||| |||||||||||||| Sbjct 77959 CCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTC 78002 >seq17158 Length=148548 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || |||||||| ||||| || || || ||||||||||| || | || |||| Sbjct 118874 AGTCTCAGTACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTTCGT 118933 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 |||||||| | ||| ||||| ||||| |||||||||||||| Sbjct 118934 CCATCTTCCAACTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTC 118977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152701761128016