Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiothrix_20spiculata_20[genbank_20GCA_5F000969725.1_202015-02-03] 75,696 sequences; 2,764,315,159 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq21453 107 2e-18 seq37837 104 2e-17 >seq21453 Length=27831 Score = 107 bits (118), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 23340 CCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTT 23399 |||||| || ||||| ||||| || | |||||| | | || || ||||| || | Sbjct 5290 CCTATCAGCAACAAACTCAATGTACTCCGACATCAGCTGAGCATTCATGCCTATCAGGTG 5231 Query 23400 TACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT-T 23458 |||| | |||||| ||| |||| ||| || ||| ||||||| ||||| | || | Sbjct 5230 GTCTGGTAGCGCATCCAATAGGAATTCTTTCTCTATGCAAACAGCCTCTTTCACAATACT 5171 Query 23459 GAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAAT 23518 || | | ||| || || ||| |||||| || | |||| | || ||||| | Sbjct 5170 GATGATTCGCTTTTTG-CTTGGTTTGCGTTTTAAGTAGGTGAACAGCAGGCAAGCAAAGT 5112 Query 23519 CACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTA 23578 | || || || |||||||| |||||||| | ||||||||| ||||| | || ||||||| Sbjct 5111 CGCAGTGGAGACCTTCATCTCTACTAATGAGTTCATTAGAGAATGTCAGGCCAGGCATTA 5052 Query 23579 ATCCTC 23584 |||||| Sbjct 5051 ATCCTC 5046 >seq37837 Length=14246 Score = 104 bits (114), Expect = 2e-17 Identities = 172/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 23340 CCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTT 23399 |||||| | ||||||||||| || | |||||| | | || || ||||| || | Sbjct 6572 CCTATCAGAAACAAATTCAATGTACTCCGACATCAGTTGAGCATTCATGCCTATCAGGTG 6631 Query 23400 TACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT-T 23458 |||| | |||||| ||| |||| ||| || ||| ||||||| ||||| | || | Sbjct 6632 GTCTGGTAGCGCATCCAATAGGAATTCTTTCTCTATGCAAACAGCCTCTTTCACAATACT 6691 Query 23459 GAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAAT 23518 || | | ||| || || ||| |||||| || | |||| | || ||||| | Sbjct 6692 GATGATTCGCTTTTTG-CTTGGTTTGCGTTTTAAGTAGGTGAACAGCAGGCAAGCAAAGT 6750 Query 23519 CACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTA 23578 | || || || |||||||| ||||| || | ||||||||| ||||| | || ||||||| Sbjct 6751 CGCAGTGGAGACCTTCATCTCTACTGATGAGTTCATTAGAGAATGTCAGGCCAGGCATTA 6810 Query 23579 ATCCTC 23584 |||||| Sbjct 6811 ATCCTC 6816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520994568054400