Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq513 87.8 3e-12 >seq513 Length=1026617 Score = 87.8 bits (96), Expect = 3e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 189470 CAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATA 189529 || ||||| | ||||| ||||||||| ||||| | || ||||| ||||||||||| || Sbjct 199423 CAAATGGTCAATGAAGGTAAAATGCATGGTTTTCTGCGGATGTACTGGGCTAAGAAAATC 199364 Query 189530 CTTGAATGGACTAGAACACCTGAAGACGCTTT-GAGTTATAGTATCTATTTGAACAACAA 189588 ||||| ||||| | | |||||||| ||||| || | | | |||| | || |||| Sbjct 199363 CTTGAGTGGACAGCATCCCCTGAAGAAGCTTTACAGGTGT-CTCTCTACCTCAATGACAA 199305 Query 189589 GTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 || ||||| || || | || ||||| || || || ||| Sbjct 199304 GTTTGAACTGGATGGAAATGACCCTAATGGTTATGTGGGT 199265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923174493257320