Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq754 98.7 8e-16 >seq754 Length=972672 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| ||||||||| | || |||| | || |||| || ||||||||||| Sbjct 126098 CTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAA 126157 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| || ||||||||| || || | || || ||||| ||| ||| ||| || Sbjct 126158 GATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATCTTTGTCTTCACATT 126217 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||| | ||| || || | || || ||||| || |||||||||||||| Sbjct 126218 TTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGGTCTTTCCGGTCAGAGTCTTCAC 126277 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 126278 GAAAATCTGCAT 126289 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | || | ||| || ||| ||| || ||||||||||||||| | Sbjct 126291 CCACCTCTCAGACGAAGAACAAGGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGCTG 126350 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || |||| || ||||||||||| ||||||| ||| ||||| || || Sbjct 126351 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGG 126410 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| || |||||| || || ||| || | | | ||| | ||| || Sbjct 126411 ATACCTTCTTTGTCCTGGATCTTCGTCTTCACATTTTCAATGGAGTCGCTTGGCTCGACT 126470 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || || ||||| ||||| || ||||| ||||| ||||| Sbjct 126471 TCAAGCGTGATGGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 126517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| ||||||||| | || |||| | || |||| ||| || || ||||| Sbjct 126554 CTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATCTTCCAATTGCTTGCCAGCGAA 126613 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| | ||||||||||||||| | || || ||||| || ||| ||| || Sbjct 126614 GATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTGTCTTGGATCTTTGTCTTCACATT 126673 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| | ||| || || | || || ||||| || |||| |||||| || Sbjct 126674 CTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTAAC 126733 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 126734 GAAAATCTGCAT 126745 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| ||||| | | || | ||| || ||| ||| ||||||||||| || || || Sbjct 126747 CCACCCCTCAAGCGAAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTATAATCACTC 126806 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || |||||||| || ||||| || | |||||||| ||||| || Sbjct 126807 AGAGTACGGCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGTGGG 126866 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || ||||| ||| || ||| || | | | ||||| | || || Sbjct 126867 ATGCCTTCTTTGTCTTGAATCTTCGTCTTCACATTCTCGATACTGTCGCTTGGTTCAACT 126926 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || | || || || || || |||||||||||||| ||||| |||||| || Sbjct 126927 TCAAGAGTGATAGTTTTACCGGTCAGAGTCTTCACGAAGATCTGCATGATG 126977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395065892645593