Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq552 233 2e-56 >seq552 Length=297145 Score = 233 bits (258), Expect = 2e-56 Identities = 398/574 (69%), Gaps = 11/574 (2%) Strand=Plus/Minus Query 14194 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 14253 |||||| | || ||||||||||| |||||||| || || || ||| | || || || Sbjct 246403 AAAAATCAGGCATGCAAAATCACAGTGAAGGCCTTCGTCCCTGGAAATCAACTCATTAGA 246344 Query 14254 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 14313 |||||| | || ||||| | |||| ||| || | |||||| |||| || || | || Sbjct 246343 AAATGTCAGACCAGGCATTAGGCCTCTTTTCTTGATCCAAAAAATTGATGCAAACGCACC 246284 Query 14314 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14373 || |||||||| ||||| || || |||||||| | | || ||| ||||| | ||| | Sbjct 246283 AGAGAAGAATATCCCCTCGACAGCCGCAAACGCAACAACTCTTTCACCAAAAGTAGCTGT 246224 Query 14374 -----TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 14428 ||| || || |||||| ||||| | | |||||||||| | | | Sbjct 246223 AGAACTTTTATCCAT--CCATTTAAATGCCCACTGTGCCTTTTTTTTAACACAGGGGAAA 246166 Query 14429 GTTTCAATAGCATTAAATAAATGTTCCTTCTCT--TTAGTACTTGAAATGTATGTATCAA 14486 |||||||||||||| || | | ||||||||| | || | ||| |||| || |||| Sbjct 246165 GTTTCAATAGCATTGAAAACCTTCTCCTTCTCTCCTGGGTCCCTGA--TGTAAGTGTCAA 246108 Query 14487 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAAC 14546 | | | | |||||||| ||||| ||||||||||| || || ||||| || || |||| Sbjct 246107 TTAACAGACAGTACATTTCGGAGTGAATGTTTTCCATGGCGATTTGAAATCCGTAGAAAC 246048 Query 14547 ATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTA 14606 |||| || || | ||||| ||| || || |||||| |||| || || ||||| Sbjct 246047 ATCTTGCCTCGGGAACTTGTATCTCCCGATAGAACCTTTCGACCAAGTTCTCTCCAACTA 245988 Query 14607 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGC 14666 | |||||||| ||||| || || |||| | | | ||| || | || |||| | | Sbjct 245987 TGCCATCACTGGCTGCGAAGAACGCCAGAACATGTGAAATGAACTGTTTTTCTTGAGAGT 245928 Query 14667 TGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAAC 14726 | ||||||| ||||||| |||| || || || || ||||| || || |||||||| Sbjct 245927 TCAGTTTTTCCCAATCGACTAAGTCATTTCCCAGGTCCACTTCTTCGACCGTCCAAAAGG 245868 Query 14727 TAGCAACAGCTTTTTTATACATTACCCATATTTC 14760 || |||| ||| || || | | |||||| || Sbjct 245867 ATGCCACAGATTTCTTGTAGAATTTCCATATGTC 245834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482333945324440