Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq754 104 2e-17 >seq754 Length=972672 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| || || || || | ||||| ||||| || || | || || ||| | Sbjct 126977 CATCATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACC 126918 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 ||||||||| | || | ||| ||| || ||| | ||||||||| | || || Sbjct 126917 AAGCGACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGA 126858 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 || || ||| | || | || ||||||||||| |||||| | ||| ||| ||||| Sbjct 126857 TCAACAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTA 126798 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCA 25034 | ||| ||||||||| |||| ||||| Sbjct 126797 TAACATTCAGAAAGAGTCCACTCTTCA 126771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418294145411360