Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq754 102 7e-17 >seq754 Length=972672 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||||| ||| || || || || || || || ||||| |||| | ||| | ||| Sbjct 126533 CAACACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATC 126592 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||||||||| ||||| || | || || |||||||| ||| || | |||||||||||| Sbjct 126593 TTCCAATTGCTTGCCAGCGAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCTTCTTTGTC 126652 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || ||| ||||| | ||| || |||| || || ||| | || ||||| Sbjct 126653 TTGGATCTTTGTCTTCACATTCTCAATGGAGTCGCTCGGCTCAACTTCAAGCGTGATGGT 126712 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || |||||||| || || || ||||| |||||| Sbjct 126713 CTTTCCGGTCAAAGTCTTAACGAAAATCTGCATT 126746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 ||| |||| ||| || || || || || || || ||||| |||| | ||| | ||| Sbjct 126077 CAAAACCAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCGCTAAGAGTGCGACCATC 126136 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 |||||| || || || || | || ||||||||||| || ||| | |||||||||||| Sbjct 126137 TTCCAACTGCTTTCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTC 126196 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 ||| ||| ||||| | ||| || |||| || || ||| | || ||||| Sbjct 126197 TTGAATCTTTGTCTTCACATTTTCAATGGAGTCGCTCGGCTCGACTTCGAGCGTGATGGT 126256 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || ||||||| || || || ||||| |||||| Sbjct 126257 CTTTCCGGTCAGAGTCTTCACGAAAATCTGCATT 126290 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || || || || |||||||| |||||||| |||| | ||| | ||||||||| || Sbjct 126315 TGAAGAGTGGACTCTTTTTGAATGTTGTAGTCGCTGAGAGTGCGACCATCTTCCAACTGC 126374 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 || || || | || | |||||| || || ||| | ||||||||||| || || Sbjct 126375 TTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGATCTTC 126434 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 ||||| | ||| || |||| || || ||| | || ||||||||||||||| Sbjct 126435 GTCTTCACATTTTCAATGGAGTCGCTTGGCTCGACTTCAAGCGTGATGGTTTTGCCGGTC 126494 Query 20186 AACGTTTTGACAAAAATTTGCAT 20208 | ||||| || || || ||||| Sbjct 126495 AGGGTTTTCACGAAGATCTGCAT 126517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419577315181173