Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq754 113 4e-20 >seq754 Length=972672 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || ||| | ||||| | ||| | ||| ||| | Sbjct 126973 ATGCAGATCTTCGTGAAGACTCTGACCGGTAAAACTATCACTCTTGAAGTTGAACCAAGC 126914 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||| |||||| | || || |||||| ||||||||||| || || ||||||||| Sbjct 126913 GACAGTATCGAGAATGTGAAGACGAAGATTCAAGACAAAGAAGGCATCCCACCCGATCAA 126854 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||||| || ||||||||||| ||||||| | | | || || |||||| Sbjct 126853 CAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGATTATAAC 126794 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || ||| | || || || || Sbjct 126793 ATTCAGAAAGAGTCCACTCTTCACCTTGTTCT 126762 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || || || ||||| | ||||| | ||| | || | | Sbjct 126746 AATGCAGATTTTCGTTAAGACTTTGACCGGAAAGACCATCACGCTTGAAGTTGAGCCGAG 126687 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| |||| ||| | || || |||||| ||||||||||| || |||||||| || Sbjct 126686 CGACTCCATTGAGAATGTGAAGACAAAGATCCAAGACAAAGAAGGCATCCCTCCCGACCA 126627 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| ||||| || | || ||||| ||| | ||||||| | | | | |||||||| || Sbjct 126626 ACAGAGACTGATCTTCGCTGGCAAGCAATTGGAAGATGGTCGCACTCTTAGCGACTACAA 126567 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||||| || || || || | |||||||| Sbjct 126566 TATTCAGAAGGAGTCGACCCTTCATCTGGT 126537 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | || || ||| | ||||| | ||| | || ||| | Sbjct 126517 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACCATCACGCTTGAAGTCGAGCCAAGC 126458 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| |||| || | || || ||||| ||||||||||| || || || || || Sbjct 126457 GACTCCATTGAAAATGTGAAGACGAAGATCCAGGACAAAGAAGGTATCCCCCCAGACCAG 126398 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||| || || | ||||||| | | | |||||||||| ||| Sbjct 126397 CAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCAGCGACTACAAC 126338 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||| || ||| | || || || || | || ||||| |||| Sbjct 126337 ATTCAAAAAGAGTCCACTCTTCACCTTGTTCTTCGTCTGAGAGGTGGAA 126289 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || | || ||||| | ||||| ||||| | || | | Sbjct 126290 AATGCAGATTTTCGTGAAGACTCTGACCGGAAAGACCATCACGCTCGAAGTCGAGCCGAG 126231 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| |||| || | || || ||||||| ||||||||||| || || || || || Sbjct 126230 CGACTCCATTGAAAATGTGAAGACAAAGATTCAAGACAAAGAAGGCATTCCCCCAGACCA 126171 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| || || || | || ||| || || | ||||||| | | | | |||||||| || Sbjct 126170 ACAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTTAGCGACTACAA 126111 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||||| || || || || | |||||||| Sbjct 126110 TATTCAGAAGGAGTCGACCCTTCATCTGGT 126081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650834319760