Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orbicella_20faveolata_20[refseq_20GCF_5F002042975.1_202017-03-20] 1,933 sequences; 485,548,939 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1707 93.3 1e-13 >seq1707 Length=334361 Score = 93.3 bits (102), Expect = 1e-13 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028 || || ||||| || || | ||||| || || |||||||||||| | | |||||||| Sbjct 217496 CCTGATGATCTTAAACCATTGTACAAGACAGTTTGGGAAATTTCCCAGAGGACTCTCATA 217437 Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088 |||||||| || || | || || || || ||| || ||||| || || || ||| | Sbjct 217436 GATATGGCAGCTGACAGAGGAGCATTCATTGATCAAAGTCAGTCATTCAATGTGTTCTTT 217377 Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 || | || | || | |||||| ||| |||||| ||||| || |||||| Sbjct 217376 GCTGAACCTAACTATGGCAAGCTGACAAGCATGCACTTCTATGGCTGGAAA 217326 Score = 89.7 bits (98), Expect = 1e-12 Identities = 92/119 (77%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || ||||| ||||||||||| || || || ||||| | || || || Sbjct 218407 GCACCAATGCCAACAGCTTCCACTGCACAGATTCTTGGCAATAACGAATCTTTTGAGCCA 218348 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 | |||||||| |||| ||| | || |||||||| || ||||||| |||| ||||||| Sbjct 218347 TACACAAGCAACATTTACTCAAGACGTGTTCTTTCAGGGGAATTTCAGGTA-TTAATAA 218290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303321320411606